| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2215 |
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| Symbol | |
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| ID | 4279127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2650689 |
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| End bp | 2651519 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638135012 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_750899 |
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| Protein GI | 114563386 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCAA TAACACAATC ACAAAATGTA GTGGTCACTG GCGCGGCATC GGGTTTAGGT
AAAGCACTGG CACTAAAATG GGCGAGTCAG CACGCCGAAG TGTGCGTTGC AGATATTAAT
AAACCAGCTG GTGAACAGGT GTGTCAAGAA ATCCAAGCGT TAGGAGGTAA AGCATTTTTC
GTACCTTGCG ATATTACCAA CACAGACAGC ATTACAGCGC TCGTACAAGT ACTGAATGAG
CGTTGGCAAC ATATCGATGT GTTAATCAAT AATGCCGGCG TTGCGTCAGC AGATAAAATT
GAAGTTGAAC CTATTTTGCA ATGGCGCTGG GTAATGGAAA TCAACCTGTT TGGTATTGTG
AATATGTGCC AACAGTTTGT TCCCATTTTT AAACAACAAG GCGTTGGCAG TATTGTCAAT
GTCGCTTCAC AAGCTGGCTT GACTCCAATC CCGTTTATGT CCAGTTACAA CGCATCAAAA
GCGGCTGTGG TGTCGTTGTC AGAAACCTTG CGCATAGAAC TTGCCGATGA CAATATCAAT
GTTAGCGTGT TATGCCCAGG CTTCTTTAAA ACCAACTTAG GCAGCAGTCT ACGTACTCAA
CTGCCCACAA TGGAAAAGCT GCTGGGTAAG CTATTTGATA AGTCACCCAT AAATGCAACG
CAAGTCGCCG ACATTGCTTA TCAAGGTGAA AGTAAAAAAC AATTCCTCTT ACTGACACAT
CAACAAGGCA AACGGCTTTA TCAGTTAAAA CGCTTATTGC CTTTGCATTG GTATTTTAAA
TTAGTATTGA AACAAACACA TCGTCTTAGG CAATTGTTAA GGGAGGAATA A
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| Protein sequence | MKPITQSQNV VVTGAASGLG KALALKWASQ HAEVCVADIN KPAGEQVCQE IQALGGKAFF
VPCDITNTDS ITALVQVLNE RWQHIDVLIN NAGVASADKI EVEPILQWRW VMEINLFGIV
NMCQQFVPIF KQQGVGSIVN VASQAGLTPI PFMSSYNASK AAVVSLSETL RIELADDNIN
VSVLCPGFFK TNLGSSLRTQ LPTMEKLLGK LFDKSPINAT QVADIAYQGE SKKQFLLLTH
QQGKRLYQLK RLLPLHWYFK LVLKQTHRLR QLLREE
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