Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2169 |
Symbol | asnC |
ID | 4279081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 2590807 |
End bp | 2592207 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638134959 |
Product | asparaginyl-tRNA synthetase |
Protein accession | YP_750853 |
Protein GI | 114563340 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0017] Aspartyl/asparaginyl-tRNA synthetases |
TIGRFAM ID | [TIGR00457] asparaginyl-tRNA synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCATTG CATCTGTCGC TTCTGTATTT AAAGGTGAAC ACGCCGTTGG TTCGCAAGTC ACTGTCCGTG GCTGGGTAAG AACTCGTCGT GATTCAAAAG CGGGTATCTC TTTCTTGGCC GTGTATGACG GTTCATGTTT CGACCCTATT CAAGGTGTCT TGCCTAATAG CCTAGCCAAT TACAATGACG ATGTATTGAA ATTGACTGCT GGCTGCTCTG TCGTAATGAC GGGTGAAGTA GTTGCCTCTC CAGGCGCTGG TCAAGCATTT GAATTACAAG TCACTGAAAT TGTGGTCACA GGTTTTGTTG ACGATCCAGA TACTTACCCA ATGTCGGCCA AACGCCACTC TATTGAGCAT TTACGTGAAC TTGCCCATTT ACGCCCACGT ACCAACATTA TTGGTGCCGT AGCTCGTGTT CGTAACTGTT TATCGCAAGC GATTCACCGC TTCTATCATC AAGAAGGTTT TATCTGGGTA TCGACCCCGT TAATTACAGC TTCTGACTGT GAAGGTGCTG GCGAAATGTT CCGTGTGTCT ACTTTAGACA TGGAAAATCT ACCTCGCACA GCTGAAGGTA AAGTCGATTA CGATAAAGAT TTCTTCGGTA AAGAATCATT CTTAACCGTG TCAGGTCAGT TAAACGCTGA AACGTATGCT TGTGCATTAT CTAAAGTGTA TACCTTTGGC CCAACGTTCC GTGCCGAAAA CTCAAACACC ACTCGCCACC TTGCAGAATT CTGGATGGTT GAGCCTGAAG TGGCATTTGC AACGTTAGAT GATGCGGCTG AGTTAGCGGA AAAAATGTTG AAATTCGCGT TTAGCGCAGT GCTTGAAGAA CGCATGGATG ATTTAAACTT CTTTAACGAA CGTGTTGATA AAACCGTTAT CGAACGTTTA CAAGCATTCG TAAGCAGTGA TTTTGCTCAA GTGGATTACA CAGATGCAGT TGAAATCCTT AAAAACTGTG GTAAGAAGTT TGAATTCGCA GTTGAATGGG GTATTGATTT ACAATCTGAG CACGAACGCT ACTTAGCTGA AGAGCATTTT AAAGCGCCTG TTGTTGTTAA GAACTACCCG AAAGACATTA AAGCTTTCTA TATGCGCTTA AACGATGATG GCAAGACTGT TGCCGCAATG GACGTGTTAG CACCAGGTAT TGGTGAAATT ATCGGTGGCG CACAGCGTGA AGAGCGTTTA GACGTGTTAG ATGCACGTTT AGCTGAAATG GATTTAAGCC AAGAAGATTA CTGGTGGTAT CGTGACCTAC GTCGTTATGG CACCGTACCT CATTCAGGTT TTGGTTTAGG TTTTGAGCGT TTAGTGTCGT ATGTGACTGG CGTTAACAAC ATTCGTGATG TTATCCCATT CCCACGCGCC CCACGCTCAG CCAGTTTCTA A
|
Protein sequence | MSIASVASVF KGEHAVGSQV TVRGWVRTRR DSKAGISFLA VYDGSCFDPI QGVLPNSLAN YNDDVLKLTA GCSVVMTGEV VASPGAGQAF ELQVTEIVVT GFVDDPDTYP MSAKRHSIEH LRELAHLRPR TNIIGAVARV RNCLSQAIHR FYHQEGFIWV STPLITASDC EGAGEMFRVS TLDMENLPRT AEGKVDYDKD FFGKESFLTV SGQLNAETYA CALSKVYTFG PTFRAENSNT TRHLAEFWMV EPEVAFATLD DAAELAEKML KFAFSAVLEE RMDDLNFFNE RVDKTVIERL QAFVSSDFAQ VDYTDAVEIL KNCGKKFEFA VEWGIDLQSE HERYLAEEHF KAPVVVKNYP KDIKAFYMRL NDDGKTVAAM DVLAPGIGEI IGGAQREERL DVLDARLAEM DLSQEDYWWY RDLRRYGTVP HSGFGLGFER LVSYVTGVNN IRDVIPFPRA PRSASF
|
| |