Gene Sfri_2167 details

Gene Information

• Locus tag: Sfri_2167
• ID: 4279079
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: +
• Start bp: 2589601
• End bp: 2590176
• Gene Length: 576 bp
• Protein Length: 191 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 638134957
• Product: NUDIX hydrolase
• Protein accession: YP_750851
• Protein GI: 114563338
• COG category: [L] Replication, recombination and repair; [R] General function prediction only
• COG ID: [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAAAC ACGAATTTAC CTTACGCTAT AATTTACATC GTCTGGGTTC AATCATCCCT 
TCTGCGCCCC CATCATACCT TGGCCGCAAA GCTGCGGTGT TAATCCCTGT TATTGAAATA 
GAGCAACAAT TACATCTAAT TTTAACCCGA CGCCCAATGC ATTTACGTCA CCATCCAGGG 
CAAATTAGTT TTCCTGGCGG CAAAGTTGAG CCTGATGATA TTAATGCCAT CCACACTGCG 
TTGCGCGAAG CTCACGAAGA AATTGGCTTA TTGTCAGAAA ATGTTGATGT TTTAGGCGTG 
TTTCCAGCCC ATAAAACCTT TACCGGTTTT GAGATCACCC CTGTCGTGGC GATGGTAAAG 
CAGCCATTTG AGTTGGTGCT CGACCCCGGT GAAGTGGATG ATTGTTTCTC AGTACCATTG 
AATTTTTTTA TTGAGCGAAG TAACCGTCAC AAAATATTTC ATTATCGCCA CGGCGAACAT 
TATCAAGTTC ACTTTATGCC ATTTGAAGAC AAATTTATTT GGGGAGTAAC GGCAGCCATT 
ATCGATTTGC TGTGTCATCA CATAGAAGAT AATTAA 

 

Protein sequence

MNKHEFTLRY NLHRLGSIIP SAPPSYLGRK AAVLIPVIEI EQQLHLILTR RPMHLRHHPG 
QISFPGGKVE PDDINAIHTA LREAHEEIGL LSENVDVLGV FPAHKTFTGF EITPVVAMVK 
QPFELVLDPG EVDDCFSVPL NFFIERSNRH KIFHYRHGEH YQVHFMPFED KFIWGVTAAI 
IDLLCHHIED N