| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2163 |
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| Symbol | |
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| ID | 4279075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2579613 |
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| End bp | 2582129 |
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| Gene Length | 2517 bp |
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| Protein Length | 838 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638134953 |
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| Product | glycogen/starch/alpha-glucan phosphorylases |
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| Protein accession | YP_750847 |
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| Protein GI | 114563334 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0058] Glucan phosphorylase |
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| TIGRFAM ID | [TIGR02093] glycogen/starch/alpha-glucan phosphorylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACAG CGAAAGATAA CGCCAGTGCT AATATCAGTA AAACCAATAG TAAAGTTGAA
GTCACTGCCG AGATATTAAT AGACGAACAA GATTGTTCTC ACGAAGAACC TTGCGATAGC
TTAAAAGCCT TATTAGCAAG ACATATGCGC TACGAGTTAT GTAGAGACGA TCACGATAAA
CATGAATTGT TTAATGCCTT AGCACAAAGC GTTAAGGAAC AAATGCTTGA TGACTGGCGA
CAAACACGGC TCAAGGATAA TCAATATCAA CAAAAACAAG TGGCCTATTT GTCATTAGAG
TTTCTGATGG GCCGAGCATT AGGCAATGCA TTATTAAGTT TAGACATTAC CGAGGATGCT
CAACAAGTAC TCACAGAGTA CGCCACTAAT TTAGAACATA TTGAACAAGT TGAGCATGAT
GCAGGGTTAG GAAATGGTGG ACTTGGACGT TTAGCGGCTT GTTTTCTCGA CAGTTGTGCT
AGTTTGGATT TACCCGTTAC AGGTTATGGT ATCCGATATC AATACGGCAT GTTTGTACAA
AAAATAATAG ATGGTTATCA GGTAGAGCGA CCCGATCGTT GGTTACGAAA TGGTAATCCT
TGGGAAGTCC GAATTTCTAA TCATATTGTT TCTGTCCCTT TTTATGGTCA TACCGAAACT
CATTCTTTTA AGCAGGGACA TCGGCATCAT GTTTTGGTTA ACACTCAAAA AGTATTAGCT
ATTCCATATG ATATGCCTAT TCCTGGTTAT AAAAATAATC GTATTAACAC CTTACGTTTG
TGGAAAGCGG AAGCCAATGA TGACTTCGAT TTAGCAGAGT TTAACGAAGG TGATTATGCA
GAAGCAGTAG CGACTAAAAA CTTGGCTGAA CAAATTACCA TGGTGTTGTA TCCCAATGAC
GCTAGCGTTA ATGGTAAAGA GTTACGGCTG AAGCAACAAT ATTTTTTATC TTCAGCCAGT
TTACAGGACC TATTAATCCG TTATGTGAAC AAGTTTGGTG AAGATTTTAG CCACTTCAGT
GAGCTTAACG TAATGCAGCT TAACGATACT CATCCTAGCA TTGCGGTGCC AGAATTGATG
CGATTGTTGC TTGATCAATA TGGCTTAAGT TGGGACGCTG CGTGGGCAAT TACAAATCAG
TCGATGGCAT ATACCAATCA TACTTTATTG CCAGAGGCAT TAGAGCGTTG GTCAGTTCCT
ATGATGAAAA ATATGCTTCC TCGTATTGTC GAAATCATAT TTGAGATTAA TGCACGGTAT
TTAGAGTTGG TGGCACATCA TTGGCCTGGT GACATTCAAA AGCTAACTGA GATGTCAATT
ATTGAAGAGG GCGGAGAACA GCAAGTTCGT ATGGCCTACT TAGCCATCGT TGCCAGTTTC
TCTGTTAATG GTGTGGCAGG GTTACATACT CAGTTACTCA AAGAGGGGTT ATTTAATAAC
TTCTATCAAT TATGGCCTAA CAAGTTTAAT AACAAAACTA ACGGTGTAAC TCCTAGACGT
TGGCTAGCAT TTTGTAACCC TAAATTATCT TCGTTGATTT GTAGTCGTTT AGGCAATGAT
TGGATTAAGG ATTTGTCACG GCTTAAGGGG CTAAATGACT GTATTAGTGA CAAAGCATTT
GTTAAAGAAT GGGCCCTGGT AAAATTTGAG AATAAACAAT CATTAACCCA ATTTGTGAGA
CAGCAGTGTG GCGTCGAATT TGATCCAAAG ATGATGTTCG ATGTGCAAGT TAAGCGTATT
CACGAATACA AGCGCCAATT GATGAATATC CTACATGTTA TCCATTTATA TCGCCGTATT
CTTAATGGAG ACACGCAGGA TATGGTGCCG CGTTGCGTGT TAATTGGTGG AAAAGCAGCC
CCTGGGTATG CCATGGCAAA ACAGATTATT AAATTGGCCA ATAATGTAGC CCATATGGTG
AATTCAGATC CTCTTGTTAC GCCATATTTA CGCATGGCAT TTATACCTAA CTATAACGTC
AGTGCGATGG AGGAAATTTG TCCGGGCACT GATTTATCTG AGCAAATATC AACAGCTGGT
AAAGAGGCTT CAGGTACAGG CAACATGAAA TTCATGATGA ATGGTGCCTT GACCATTGGC
ACATTAGATG GCGCCAATAT TGAAATGCTT GAAGAGGTTG GCCATGAAAA CTTCTTCTTA
TTTGGCTTAA ATGCTAGCCA AGTAACGCAA GCTCGTATGG ATTACCAACC TCAACACATT
ATTGATCATT CGCCAGCCTT TCAAGGGGTG ATGAATATGT TAGAAAGTGG TCATTTTAAT
TTGGTCGAAC CGGGGATTTT CGACAGCATT ATTGCCTCGA TTATCGACCC TAATGATCAA
TGGATGACGG CCGCTGATTT TGACAGTTAT TGCCAAGCAC AAGCGCTGGT GGCAAAAACC
TATCTTGATC AAGATAGTTG GCAAGAAATG AGTATTAAAA ATACCGCTGC AAGCGGGCGT
TTTTCAAGCG ACAACACCAT AGCGGGCTAC CGCGACGAAA TTTGGATGAA AAAGTAA
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| Protein sequence | MTTAKDNASA NISKTNSKVE VTAEILIDEQ DCSHEEPCDS LKALLARHMR YELCRDDHDK
HELFNALAQS VKEQMLDDWR QTRLKDNQYQ QKQVAYLSLE FLMGRALGNA LLSLDITEDA
QQVLTEYATN LEHIEQVEHD AGLGNGGLGR LAACFLDSCA SLDLPVTGYG IRYQYGMFVQ
KIIDGYQVER PDRWLRNGNP WEVRISNHIV SVPFYGHTET HSFKQGHRHH VLVNTQKVLA
IPYDMPIPGY KNNRINTLRL WKAEANDDFD LAEFNEGDYA EAVATKNLAE QITMVLYPND
ASVNGKELRL KQQYFLSSAS LQDLLIRYVN KFGEDFSHFS ELNVMQLNDT HPSIAVPELM
RLLLDQYGLS WDAAWAITNQ SMAYTNHTLL PEALERWSVP MMKNMLPRIV EIIFEINARY
LELVAHHWPG DIQKLTEMSI IEEGGEQQVR MAYLAIVASF SVNGVAGLHT QLLKEGLFNN
FYQLWPNKFN NKTNGVTPRR WLAFCNPKLS SLICSRLGND WIKDLSRLKG LNDCISDKAF
VKEWALVKFE NKQSLTQFVR QQCGVEFDPK MMFDVQVKRI HEYKRQLMNI LHVIHLYRRI
LNGDTQDMVP RCVLIGGKAA PGYAMAKQII KLANNVAHMV NSDPLVTPYL RMAFIPNYNV
SAMEEICPGT DLSEQISTAG KEASGTGNMK FMMNGALTIG TLDGANIEML EEVGHENFFL
FGLNASQVTQ ARMDYQPQHI IDHSPAFQGV MNMLESGHFN LVEPGIFDSI IASIIDPNDQ
WMTAADFDSY CQAQALVAKT YLDQDSWQEM SIKNTAASGR FSSDNTIAGY RDEIWMKK
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