| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2154 |
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| Symbol | |
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| ID | 4279066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2563607 |
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| End bp | 2564239 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638134944 |
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| Product | hypothetical protein |
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| Protein accession | YP_750838 |
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| Protein GI | 114563325 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2095] Multiple antibiotic transporter |
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| TIGRFAM ID | [TIGR00427] membrane protein, MarC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0620075 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGATTTTA TGCTTTATAT CAAGTTCTTT TTAGGACTGT TAGCCATCAT TAACCCAGTA
GGGTTATTAC CTGTATTTGT GAGCTTAACC AGCCATCAAA CTGAAGCTGA TCGCCAAAAT
ACTAATCGTG ATGCAAATAT GGCCGTAGTG ATCATTCTAT TGGTGACGGC AATAGCAGGC
CATTACATTC TTAGTATGTT CAGTATTTCA TTATCGGCTT TTCGTATTGC CGGTGGTAGC
TTGATTTGTA TTATTGCGAT GTCGATGTTG CAAGGTAAAA TCAGTGAAGT GAAACGCAAC
CAAGAAGAAG ACCGTGAGTC TTCAGGGATG GAATCTGTTG CAGTTGTGCC ATTAGCTTTG
CCATTAATGG CTGGTCCTGG TGCCATTAGT GCGGTGATTG TGTTTGCGGC GGAGCATCAC
CAAATAACCA ACTACATTGG TATGTTTTTA ACCATTATTA CCTTAGGCCT TGTTAGTTGG
GGTTTATTTC GTATGGCGCC AATGCTGTTT AAACTATTAG GTAAAACTGG CATTAACGTT
ATTACCCGTC TAATGGGCCT ACTGATGTTG TCTTTAGGCA TTGAAGTGAT TGCCGCAGGT
GTTAAAGGAC TTTTCCCTAC CTTAATAGGT TAG
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| Protein sequence | MDFMLYIKFF LGLLAIINPV GLLPVFVSLT SHQTEADRQN TNRDANMAVV IILLVTAIAG
HYILSMFSIS LSAFRIAGGS LICIIAMSML QGKISEVKRN QEEDRESSGM ESVAVVPLAL
PLMAGPGAIS AVIVFAAEHH QITNYIGMFL TIITLGLVSW GLFRMAPMLF KLLGKTGINV
ITRLMGLLML SLGIEVIAAG VKGLFPTLIG
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