| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2130 |
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| Symbol | |
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| ID | 4279042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2534002 |
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| End bp | 2536731 |
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| Gene Length | 2730 bp |
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| Protein Length | 909 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638134919 |
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| Product | DNA gyrase, A subunit |
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| Protein accession | YP_750814 |
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| Protein GI | 114563301 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.717755 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGATC TGGCATCATC TATTTCGCCA ATTAACATCG AAGACGAACT TAAGAATTCT
TACCTTGATT ACGCAATGAG TGTAATTGTA GGTCGTGCTT TACCTGACGT CCGTGACGGT
TTAAAACCAG TTCACCGTCG AGTATTGTTC GCAATGAGCG AATTAAAAAA CGATTGGAAC
AAACCATATA AGAAATCCGC TCGTGTCGTT GGTGACGTAA TTGGTAAATA TCACCCACAC
GGTGATACAG CTGTATACGA TACAATTGTA CGTATGGCGC AACCGTTCTC GCTACGCTAC
ACATTGATTG ACGGACAAGG AAACTTTGGT TCGGTCGACG GTGACTCGGC AGCGGCGATG
CGTTATACCG AAATCCGCAT GCAAAAGTTG GCGCATTCAT TATTAGCCGA CCTTGAAAAA
GAAACTGTGG ATTTTGTGCC TAACTACGAT GGCACCGAAA TGATCCCTGC GGTGTTACCA
ACACGTGTAC CGAACCTATT AATCAATGGT TCATCAGGTA TTGCGGTTGG TATGGCCACT
AACATTCCAC CTCACAACTT AACAGAAGTA GTGAAAGGCT GTTTGGCGTT AATCGAAGAT
CCAAGTTTAT CGATTGAACA GTTAATGGAA TACATTCCAG GTCCAGATTT TCCAACGGCA
GCTTCAATAA ACGGTCGCAA AGGCATTATC GATGCTTATA ACACTGGCCG TGGACGCGCT
ATCATGCGCT CTAAAGCGGA AATTGAAACT GAAGAGAATG GTCGTGAACG TATTATTGTT
CATGAAATTC CATATCAAGT TAACAAAGCC CGTTTGATTG AAAAAATTGC CGAGCTTGTT
AAAGATAAAA AATTAGAAGG TATCAGTGGC CTACGCGATG AGTCTGATAA AGACGGTATG
CGTATTGTTA TTGAAATCAA ACGTGGTGAA GTGGGTGAGG TTGTACTAAA CAACTTATAT
TCTCAAACAC AAATGCAGTG TTCTTTTGGT ATCAACATGG TGGCATTGAC TAACGGTCAG
CCTAAATTGT TTAACCTTAA AGAAATGCTG GAGTGTTTTA TTCTTCACCG TCGTGAAGTG
GTCACGCGCC GTACTGTATT TGAACTGCGT AAAGCCCGTG AACGTGCTCA TGTTCTTGAA
GCACTTGCCA TTGCATTGGC TAACATCGAC CCTATTATTG CGCTTATTAA AGCCTCTCCT
ACACCTGCTG AAGCCAAAGC AAAATTGGTT GCACAAGGTT GGGAATTAGG TCATGTACAA
GGCATGCTTG AAAAAGCTGG TGATGACGCT GCACGCCCTG AATGGTTAGA GCCTGAGTTC
GGTATCCGTG ACGGTCAGTA CTATTTAACT GAGCAACAAG CACAAGCGAT TTTGGAATTA
CGTCTGCACC GTTTAACCGG TCTAGAACAT GACAAGATTT TAGCTGAATA TGAAGAGCTT
TTAGTTCTGA TTGCAGGTTT GTTATTCATT CTTCGTACTC CATCTCGTTT GATGGAAGTG
ATTAAAGAAG AACTTGAAGA AATACTTGAG CAATACGGTG ATGAACGTCG CACTATTATT
AACGCTAATG AAATTGATAT GAGTCTTGAA GACTTAATCA ATGAAGAAGA CGTTGTAGTG
ACCTTGTCTC ACTTAGGTTA TGCGAAATAC CAAGTACTGT CTGATTACCA AGCGCAGCGT
CGTGGTGGTA AAGGTAAAGC CGCAACTAAA GTAAAAGATG AAGACTTTGT AGAAAAGTTA
TTGGTGGCAA ACACTCATGA CACCATCTTG TGTTTCTCTG ACTTTGGTAA GATGTACTGG
CTAAAAGTGT ATCAATTACC ATTGGCAAGT CGTACTGCCC GTGGTCGTCC AATTGTTAAC
TTATTACCAC TATCTGACGG TGAGCACATT ACTGCCATTC TACCGGTACG TGAGTATGCA
GATGATAAAT ATATCATCAT GGCAACAGCA CACGGTACCG TGAAGAAAAC AGCATTAACA
GCATATAGTA ACCCTCGTGC AAACGGCATT ATTGCTGTGA ACCTAAAAGA CGGCGACCAA
TTAATTGGCG TTGATATTAC TGAAGGTAGT GACGACATTA TGTTGTTCTC TAACGAAGGT
AAAGTGGTTC GCTTTAATGA GAAAGCGCGT GATTCTGAAA CCGGTGAAGT GAAGATAGAT
GCTGAAACTG GCGAAGAAAT CATTGCACTG CGCCCTATGG GTCGTACTGC TACCGGTGTT
CGTGGTATTA AGCTTGATGC GGGCCAAAAA GTGGTGTCGT TAATTGTGCC TAAAGGTGAC
GGTGCAATTT TAACCGTAAC TGAAAATGGT TACGGTAAAC GTACAGAGCT AAGTGAATAC
CCAGCGAAGA GCCGCGGTAC TAAAGGTGTT GTGTCGATTA AAGTCAGTGA ACGTAACGGT
GAAGTAGTCG GTGCTGTTCA AGTGGGTACT TTTGACGAAA TCATGTTGAT CAGTAATAAA
GGCACCTTAG TGCGTACTCC TGCTGAAGGC GTATCCATTA TTGGTCGTAA CACTCAAGGT
GTGACCATCA TCCGTACCGC AGAAGACGAG AAAGTCGTTG GTTTGCAACG TATTGAAGAA
ATTCAAACTG AAGAGCTGTT AGACGAAGAA GGCAATGTTA TTCCAGTAAG CGATGTTATC
GATGCTGAAG TGACAGATGC TGAGTCAACT GACGATGTTG AAGCAACAGA TCCAGATGAA
GCCAAAACCG GAGATGACGA ACAAGAGTAG
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| Protein sequence | MTDLASSISP INIEDELKNS YLDYAMSVIV GRALPDVRDG LKPVHRRVLF AMSELKNDWN
KPYKKSARVV GDVIGKYHPH GDTAVYDTIV RMAQPFSLRY TLIDGQGNFG SVDGDSAAAM
RYTEIRMQKL AHSLLADLEK ETVDFVPNYD GTEMIPAVLP TRVPNLLING SSGIAVGMAT
NIPPHNLTEV VKGCLALIED PSLSIEQLME YIPGPDFPTA ASINGRKGII DAYNTGRGRA
IMRSKAEIET EENGRERIIV HEIPYQVNKA RLIEKIAELV KDKKLEGISG LRDESDKDGM
RIVIEIKRGE VGEVVLNNLY SQTQMQCSFG INMVALTNGQ PKLFNLKEML ECFILHRREV
VTRRTVFELR KARERAHVLE ALAIALANID PIIALIKASP TPAEAKAKLV AQGWELGHVQ
GMLEKAGDDA ARPEWLEPEF GIRDGQYYLT EQQAQAILEL RLHRLTGLEH DKILAEYEEL
LVLIAGLLFI LRTPSRLMEV IKEELEEILE QYGDERRTII NANEIDMSLE DLINEEDVVV
TLSHLGYAKY QVLSDYQAQR RGGKGKAATK VKDEDFVEKL LVANTHDTIL CFSDFGKMYW
LKVYQLPLAS RTARGRPIVN LLPLSDGEHI TAILPVREYA DDKYIIMATA HGTVKKTALT
AYSNPRANGI IAVNLKDGDQ LIGVDITEGS DDIMLFSNEG KVVRFNEKAR DSETGEVKID
AETGEEIIAL RPMGRTATGV RGIKLDAGQK VVSLIVPKGD GAILTVTENG YGKRTELSEY
PAKSRGTKGV VSIKVSERNG EVVGAVQVGT FDEIMLISNK GTLVRTPAEG VSIIGRNTQG
VTIIRTAEDE KVVGLQRIEE IQTEELLDEE GNVIPVSDVI DAEVTDAEST DDVEATDPDE
AKTGDDEQE
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