| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2129 |
|---|
| Symbol | |
|---|
| ID | 4279041 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | - |
|---|
| Start bp | 2532733 |
|---|
| End bp | 2533824 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 638134918 |
|---|
| Product | phosphoserine aminotransferase |
|---|
| Protein accession | YP_750813 |
|---|
| Protein GI | 114563300 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1932] Phosphoserine aminotransferase |
|---|
| TIGRFAM ID | [TIGR01364] phosphoserine aminotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.246141 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGCGA TTTATAATTT CTGTGCTGGA CCTGCCATGT TACCTCAAGC TGTAATGCAA
AAAGCACAAC AGGAATTAGT TGATTGGAAT GGCCTAGGCG TCTCCGTGAT GGAAATCAGT
CATCGCAGTA AAGAGTTTAT TGCCCTGACC GATCAAGCTG AGGTGACATT ACGCAAGTTG
ATGAGCATTC CTGCTAATTA CCACGTGTTA TTTATGCACG GTGGTGGCCG AGCTCAATTT
TCTAACGTGG TGAATAACTT TCTTGGCGAT AATGGTCAGG CACTTTATTT GGTCAGTGGT
CAGTGGTCAT CGGCCGCAGT AACTGAAGCG AAGAAATTGG TAAGCGAGCA CAATATTGAC
AGTATCAATA TTGTTGAGCA GATCAATGGG CTTTATCAGG TTAAATTACC AGACTTAACG
GCAATCGATA AAGATTATCG TTATGTGCAT TACTGCTCAA ATGAAACCGT AGATGGCATC
GAGATTTTTG AAGAGCTAGA CAGTCCATGG CCAATTGTTG CTGATTTATC ATCGACCATC
ATGTCGCACG AAATTGATGT CAGCAAATAC GGTCTTATTT ATGCCGGCGC ACAAAAGAAC
ATTGGCCCGT CAGGCTTGTC GATTGTCATT GTGCGTGACG ATATGCTTAA ACTACCAAGT
CTGCCGCAAT CATCAGTAAT GGATTATCGC GTTGCCGTTG AGCATGGCTC TATGTTTAAT
ACACCGCCAA CGTTTGCTTG GTATCTAGCC TCGGAAGTGT TTGCATGGTT AGCCGCAAAG
GGTGGCGTAA GCGCGATGGC TGAAGTGAAC CAACAAAAAG CTGCGTTACT GTATGATTGT
ATCGACAGTA ATCCGTTTTA TAAAAACGGT GTGGCACCTC ATAACCGCTC ACGCATGAAT
GTCACCTTTC AACTAGTGAA TGATGCCCTC GACAGCGAGT TTTTAGCTCA AGCAGAGCAG
GCAGGTTTAG TCGCGTTAAA AGGTCATCGT ATTGTCGGTG GAATGCGTGC CAGTATTTAT
AACGCCATGC CACTTGCCGG TGTACAAGCG TTAGTAGACT TTATGAATAA CTTTGCCGTA
AAGCACAGTT AA
|
|---|
| Protein sequence | MSAIYNFCAG PAMLPQAVMQ KAQQELVDWN GLGVSVMEIS HRSKEFIALT DQAEVTLRKL
MSIPANYHVL FMHGGGRAQF SNVVNNFLGD NGQALYLVSG QWSSAAVTEA KKLVSEHNID
SINIVEQING LYQVKLPDLT AIDKDYRYVH YCSNETVDGI EIFEELDSPW PIVADLSSTI
MSHEIDVSKY GLIYAGAQKN IGPSGLSIVI VRDDMLKLPS LPQSSVMDYR VAVEHGSMFN
TPPTFAWYLA SEVFAWLAAK GGVSAMAEVN QQKAALLYDC IDSNPFYKNG VAPHNRSRMN
VTFQLVNDAL DSEFLAQAEQ AGLVALKGHR IVGGMRASIY NAMPLAGVQA LVDFMNNFAV
KHS
|
|---|
| |