| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2118 |
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| Symbol | |
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| ID | 4279030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2520186 |
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| End bp | 2521028 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638134907 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_750802 |
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| Protein GI | 114563289 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000143066 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGATG ACAAAGGATT TGATGGCAAA GGATTTGATT ACACAGGTAA AAATGTTGTT
GTGGTTGGCG GTACATCTGG AATAAACCTT CAAGTTGCGA TTCAATTTGC TAGCGCTGGA
GCCAATGTTG CGGTCGCGAG TCGCAGTATT GATAAAGTTA ATGCCGCGGT AGAATTACTG
AACCAAGCTA ACCCAAACGC CAAGCATTTA GGCGTCAGTT TTGATGTACG TGACAATGAT
GCATTAACGG TTGGTTTTGC AAAAATTGCA GATCTCTACG GTCATATCGA TGTGTTAGTG
AGTGGGGCTG CGGGTAACTT TCCGGCCAGT GCGGCAAAGC TTTCGAACAA TGGTTTTAAA
TCGGTTATTG ATATTGATTT AATTGGCAGT TTTCAAGTGT TAAAACAAGC TTACCCATTA
TTATCACGTC CGAATGCCAG CATTATTCAA ATTTCAGCAC CACAAGCGTA TATCGCGATG
CCATTACAAG TGCATGTTTG CGCCGCTAAA GCCGGCGTCG ATATGTTAAC TCGTACATTA
GCACTAGAGT GGGGTGTTGA AGGGATACGA ATTAACTCTA TCGTACCAGG CCCAATAGCA
GATACCGAAG GCTTTAACCG CTTAGCGCCC AGTGATGAAA TGCAACAGCG AGTGGCCAAT
AGTGTGCCGC TAAAACGCAA TGGCAAAGGT CAAGATATTG CCAACGCAGC CTTATTCCTT
GCATCCGACA TGGCGTCATA CATTACCGGT GTTGTATTAC CAGTAGACGG TGGTTGGTCA
TTGGGTGGTG CCAGTATTGC AATGACAGAA TTAGGCGACA TAGCCGCCAA GCACGGTTTA
TAA
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| Protein sequence | MFDDKGFDGK GFDYTGKNVV VVGGTSGINL QVAIQFASAG ANVAVASRSI DKVNAAVELL
NQANPNAKHL GVSFDVRDND ALTVGFAKIA DLYGHIDVLV SGAAGNFPAS AAKLSNNGFK
SVIDIDLIGS FQVLKQAYPL LSRPNASIIQ ISAPQAYIAM PLQVHVCAAK AGVDMLTRTL
ALEWGVEGIR INSIVPGPIA DTEGFNRLAP SDEMQQRVAN SVPLKRNGKG QDIANAALFL
ASDMASYITG VVLPVDGGWS LGGASIAMTE LGDIAAKHGL
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