| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2018 |
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| Symbol | |
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| ID | 4278930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2391013 |
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| End bp | 2391771 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638134805 |
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| Product | fumarate/nitrate reduction transcriptional regulator |
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| Protein accession | YP_750702 |
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| Protein GI | 114563189 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.831368 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGTATGT CTTCAGATTT GATTAAACCT CGTCGTCCAT CAACTAGCGG TTGCGCCATT
CATTGTCACG ACTGCAGTAT GGAAGCCCTG TGTATCCCTT TCACGTTAAA CAATGATGAG
CTTGATAAAC TCGACAGCAT TATTGAACGT AAAAAACCCA TTCAAAAAGG TGACCTTATC
TTTAAGTCTG GTGACGTGCT TAAGTCCCTC TATGCAATTC GCTCCGGTAC AATCAAAAGC
TATACCATCA CTGAGCAAGG TGATGAGCAA ATTACTGGAT TCCATTTGGC CGGTGACGTC
ATTGGTTTTG ATGGTATTCA TGCACAACGC CATCAAAGCT TTGCCCAAGC GCTAGAAACC
TCAATGGTCT GTGAAATCCC CTATGACACA TTAGATGATT TATCTGGATC GATGCCTAAG
CTGCGCCAGC AAATTATGCG TTTAATGAGT AATGAAATAA TGAGTGATCA AGAGATGATC
CTCCTGCTTT CAAAGAAAAA TGCCGAAGAA CGTTTAGCTG CATTTATCAA TAACCTGGCT
AATCGCTTTG GTAATAGAGG TTTCTCGCCT CATGAATTCC GTCTGACAAT GACTCGTGGT
GATATCGGCA ACTATTTAGG CCTAACAGTT GAGACTATTA GCCGCTTATT AGGGCGGTTT
CAAAAATCAG GTTTAATTGA GGTCAAAGGT AAGTATATTT CTATTATCGA TCACTCGGCA
TTAAGTACCC TTGCAGGAAA TGCTCGCATC GCCACTTAA
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| Protein sequence | MGMSSDLIKP RRPSTSGCAI HCHDCSMEAL CIPFTLNNDE LDKLDSIIER KKPIQKGDLI
FKSGDVLKSL YAIRSGTIKS YTITEQGDEQ ITGFHLAGDV IGFDGIHAQR HQSFAQALET
SMVCEIPYDT LDDLSGSMPK LRQQIMRLMS NEIMSDQEMI LLLSKKNAEE RLAAFINNLA
NRFGNRGFSP HEFRLTMTRG DIGNYLGLTV ETISRLLGRF QKSGLIEVKG KYISIIDHSA
LSTLAGNARI AT
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