| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1930 |
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| Symbol | |
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| ID | 4278842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2289335 |
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| End bp | 2290522 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638134714 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_750614 |
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| Protein GI | 114563101 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000699486 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCTACTA AAAAACAAAT AATATTACCC ATCATAGTAT TAGGTATTGG AATAGCCGGT
TTAGTTGGGA TTGCTGCACT AAAAAAACCG CCTGAAGAAA AGCCTGCAGT TGATACCACC
CCTTTAGTGT CGGTTGAAGC ACTTGAATAT AAACCGATGA CCTTCTCAGT CAGTTCATAC
GGTGTTGTCG CGGCAAAATA CGACACCGAA CTCGTCGCAC AAGTCAGCGG TGAAATTATT
TATTTAGCCG ATAAATTCGT CAAGGGTGGC TTTGTTAAAA AAGGTGATGT TCTAGCTAAA
ATTGATCCCA GTGACTATGA AGCAGGTTTA TTGGATGCTC AAGCAAACAT AGCCTCATCT
AAAGCAAACA TGGTGCAAGA ACGAGCCAAT GCGGAAGTCG CCTTACGAGA ATGGGCCGAG
ATAACCAGCA GTAAGCCAAC CGATCTCAGT TTACGCAAGC CACAATTAGC ACAAGAATTA
GCCAAACTAA AAAGTGCTGA AGCGGGTTTA TTACGTGCAC AACGTGATTT AGAGCGTACG
GTTATCCGCG CGCCGTATGA TGCACTGATT TCCAGCCGTG AAATCGGTTT AGGTGCATAC
GTCACCACTG GCAGTAAAAT TGGTCATGTT TACAATACTG ATACAGCAGA AATCCGCTTA
CCGCTTGCCG ATAAAGAAAT GCAATATTTA GATCAAAAAG GCACTCATGC TGAGGTACGA
TTAGTGGGTA ACTTTGCTGG AAGCAAACAA GAGTGGATAG GAAAAATTGT TCGCAGTGAA
GGCGTGGTCG ACAGCAAAAG CCGCATGACA TACCTGGTTG CCGAAATAGA CGACCCATAC
GGACTCAATA GCGATAAAAA TGAATTACGA TTTGGCACCT ATGTTACCGC CTATGTTGAA
GGCAGTAATG CCGGTAATGT GGCCATTATT CCGCGTCATT TGATTGTAAA TGGTTTAGTT
GCCGTGATGG ATAGCGACAA AACCTTACGT TATAAACCTG TTAACATTAT TCGCCAAGAA
GGCGCGAATG TCGTGATTTC AGAAGGTATT GAATCAGGCG TGCAAGTTAT TACATCAGCG
CTTGATTACC CGCTAGAAGG TATGCAACTC GCTTTGCCTG AAGATAAAAT CTTACAAGAT
GAGTCAGTAG AAACAGAAAA AACTGAACTT GCGATGGAAG GTAAATAA
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| Protein sequence | MATKKQIILP IIVLGIGIAG LVGIAALKKP PEEKPAVDTT PLVSVEALEY KPMTFSVSSY
GVVAAKYDTE LVAQVSGEII YLADKFVKGG FVKKGDVLAK IDPSDYEAGL LDAQANIASS
KANMVQERAN AEVALREWAE ITSSKPTDLS LRKPQLAQEL AKLKSAEAGL LRAQRDLERT
VIRAPYDALI SSREIGLGAY VTTGSKIGHV YNTDTAEIRL PLADKEMQYL DQKGTHAEVR
LVGNFAGSKQ EWIGKIVRSE GVVDSKSRMT YLVAEIDDPY GLNSDKNELR FGTYVTAYVE
GSNAGNVAII PRHLIVNGLV AVMDSDKTLR YKPVNIIRQE GANVVISEGI ESGVQVITSA
LDYPLEGMQL ALPEDKILQD ESVETEKTEL AMEGK
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