Gene Sfri_1914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1914 
Symbol 
ID4278826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp2264213 
End bp2264839 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content40% 
IMG OID638134698 
Productreplication initiation regulator SeqA 
Protein accessionYP_750598 
Protein GI114563085 
COG category[L] Replication, recombination and repair 
COG ID[COG3057] Negative regulator of replication initiationR 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.000265727 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATACA TTGAAATTGA CGAAGAACTT TATCGCTTTA TTGCCAGTAA AACTGAACGC 
ATCGGCGAAA GCGCTTCCGA TATTTTGCGT CGTTTATTGA ACTTGTCAGT AGAAAATGTC 
GATGTAAGCT TACCGACAGA CATTAGTCAC CCAAGTTTAG AATCGCAATC GCCAGTGAAT 
CGTCATCCCG TTTTTGATCA AGCCAAAGCG GCTGTAGAAA AAGTCATCGC TGATCAAAAT 
AGCGCAAATG AGCATTATCC TGTAGATGAA GACATTGCAT CGTCAACCAG TATTGATTTT 
GATGCCATGG TTAGCCAGCA CTTATTGAGC CAACAGAAAG GTGCCGTCGG GCGTTTTATG 
TATTTATTAT CCAGTCTTGA ATCCACTGCT GGCAGTGATT TTGACAAAGT GCTTAATGTG 
CAAGGCAAAG GACGTTTGTA TTTTGCCCGT TCTAAACAGG CTTTATTAAA TTCAAGTAAA 
TCTTCTAATC CAAAAGAAAT CGCGTCAAGT GGATTTTGGG TCACCACCAA TAACAATACC 
GCCAAAAAAC AAACCATCTT AACTGAGGTA TTGGAACATT TAGGTTGTGA CAGTGAAAGA 
GCGAAGAGCA TCGCCGAACA CATTTAA
 
Protein sequence
MKYIEIDEEL YRFIASKTER IGESASDILR RLLNLSVENV DVSLPTDISH PSLESQSPVN 
RHPVFDQAKA AVEKVIADQN SANEHYPVDE DIASSTSIDF DAMVSQHLLS QQKGAVGRFM 
YLLSSLESTA GSDFDKVLNV QGKGRLYFAR SKQALLNSSK SSNPKEIASS GFWVTTNNNT 
AKKQTILTEV LEHLGCDSER AKSIAEHI