Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1909 |
Symbol | |
ID | 4278821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 2260674 |
End bp | 2261861 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638134693 |
Product | hypothetical protein |
Protein accession | YP_750593 |
Protein GI | 114563080 |
COG category | [S] Function unknown |
COG ID | [COG4394] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00034683 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGTCA ATAATTCCAA CCCATTACAT CATCATTGGG ATATCTTTTG TACTGTTGTC GATAACTATG GCGACATAGG TGTCACCTGG CGTTTGGCTA AGCAATTGGT AGCAGAATAT GACATCCCCA TTAATTTATG GGTCGATGAC TTGCTGAGTT TTTCACATAT TTTACCTATG CTAGATCCAC AAAAATCGAA ACAAACATTC AATGGAGTGA ATATATTTCA ATGGAATAAC CCATTAGATA TAGAGTTTAC TGCTGGTAGC GTCGTTATTG AAGCATTTGC CTGTGAATTA CCATCACAAA TAAAATCCAT AATAAATCAA TTGCATCAAC ACCCTCTTTC TCAAGCGCCT ACTTGGTTAA ACCTTGAATA CCTCAGTGCT GAAGATTGGG TAGAGGGTTG CCATGGGTTG CCCTCTTCAC AACCTAGTGG AGTTAAAAAG TGGTTCTACT TCCCAGGTTT TACCACTAAG ACTGGCGGGC TTATCTGTGA GCGTGAATTA TTTAATCAAC GAGACGAATG GCAAGCTGAC TCTACACATA AATTAGCGTT GTTCAAAAAG CTGGGTTTAC AAGGGATAAA TGCCGAAGAC ACGGTTATCA GTGTCTTTAG TTATGAAACA CCAGCCTTAG CTGCGTTGTG TGAATTATGG CAAGCATCTC TAACCCCAAT TCATGCTCTA ATCCCTAAAG GACGAAGTTT ACATAGCTTA ACTAGCATAT TGCCCTGTGA CATTAAAGAT TTGATACCCG GTCAACAATT TACAATAGGT AACTTAACCC TACATATATT ACCCATGACC GATCAAAATG GTTTCGATCG CTTGCTATGG AGCTGTGATT TTAATATTGT GCGGGGTGAA GATTCGTTTT TACGTGCTCA ATGGGCTGCA AAACCCTTCA TATGGCACAT TTATCCTCAA GAAGATGATT ATCACTTGGT AAAATTACAA GCTTTTATGC AAATTTACTG CGATAATCTT GCTCCAGAAA TTGCTACTAC TTGGTCTGAG GTGAATTTGG CCTTCAATCA GGGGAATACA AATGCAGTAG TAATGCACTG GCAACAATTA CATTCTGTTA ATTTGTCTTT AATGCAACAT GCTATTGAAT GGCCAATTAA CGCGTTAAAT GAAGCAGATC TTGCGAGTCG ACTAGTTCAA TTCGTTAACA ATAGCTAA
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Protein sequence | MSVNNSNPLH HHWDIFCTVV DNYGDIGVTW RLAKQLVAEY DIPINLWVDD LLSFSHILPM LDPQKSKQTF NGVNIFQWNN PLDIEFTAGS VVIEAFACEL PSQIKSIINQ LHQHPLSQAP TWLNLEYLSA EDWVEGCHGL PSSQPSGVKK WFYFPGFTTK TGGLICEREL FNQRDEWQAD STHKLALFKK LGLQGINAED TVISVFSYET PALAALCELW QASLTPIHAL IPKGRSLHSL TSILPCDIKD LIPGQQFTIG NLTLHILPMT DQNGFDRLLW SCDFNIVRGE DSFLRAQWAA KPFIWHIYPQ EDDYHLVKLQ AFMQIYCDNL APEIATTWSE VNLAFNQGNT NAVVMHWQQL HSVNLSLMQH AIEWPINALN EADLASRLVQ FVNNS
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