| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1889 |
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| Symbol | |
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| ID | 4278347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2233297 |
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| End bp | 2235573 |
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| Gene Length | 2277 bp |
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| Protein Length | 758 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638134673 |
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| Product | acyl-CoA dehydrogenase |
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| Protein accession | YP_750573 |
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| Protein GI | 114563060 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.314631 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTATCG TCATATTGCT AGTTATAGCG ATCATTGTCC TCTTTGGCGT GCGTAATATC
AGGATGCAAT TTATCACGCG TCCAGTATTT TCGTTCTTCA AAAAAGTGTT GCCTCCTTTG
TCGACTACCG AGAAAGAAGC AATGGAAGCG GGTGATGTTT GGTGGGAAGG TGAGTTATTC
CGCGGAAAAC CAAACTGGAA TACCTTACAT AGTTACGGTA AACCAACCTT AAGTGCAGAT
GAACAAGACT TTCTTGATAA TCAAGTTAAC ACCGCATTAA CCATGATTGA CGATTTTGAT
ATCGTCCATA ACCGTAAAGA TCTCCCGCCA GAGTTATGGC AATATTTTAA AGAACAAGGC
TTCTTCGCAT TAATCATTCC TAAAAAGTAC GGTGGACGCG AGTTTTCAGC ATATGCAAAC
TCAACAATTG TAGCCAAAAT TGCCACGCGT AGTGTCAGTG CAGCCGTGAC TGTAATGGTA
CCTAACTCTT TAGGCCCTGG TGAGTTGTTG ACACATTACG GTACTCAAGA GCAAAAGGAG
CGTTGGTTAC CTTCGCTTGC AGTTGGTAAA GACATTCCCT GTTTTGCGCT TACAGGCCCA
GAAGCGGGTA GTGACGCTGG TGCAATACCC GATATCGGTG TTGTTTGCCT GCGCGAATTT
GAAGGCGAAG AGACATTAGG CTTAAGCCTA ACGTGGAACA AACGCTATAT TACCTTAGCG
CCAGTTGCTA CTGTACTCGG TTTAGCGTTC CAAATGCGCG ATCCCGACGG TTTACTCGGT
GACGTTAAAA ACATTGGCAT AACGTGCGCG TTGATCCCAA CTGACCATAA AGGTGTTGAG
ATTGGTCGTC GTCATAACCC ATTAATGATG GCGTTTATGA ACGGTACAAC AAGTGGTGAA
GATGTATTTA TTCCATTAGA TTGGATTATT GGTGGCCCAC AGTTTGCCGG TAAAGGCTGG
CGTATGCTGG TTGAATGCTT GTCTGCAGGA CGTGGTATCT CATTACCTGC TCTGGCAACC
GCATCGGGCC ATGTGTGTAC CAAAACGACC ACAGCCTACA GTTATGTTCG TCAGCAGTTT
GGTATGCCTA TTGGTCTGTT TGAAGGTGTA CAAGAAGCGA TGGCGCGTAT TATCGCCAAT
ACTTACCAGC TTGAAGCTGC ACGTCGCTTA ACCACGCAAG GTATCGACTT AAAAGTTAAA
CCTTCTGTGG TGACTGCAAT TGCAAAATAC CACATGACAG AGCTAGGCCG TGATGTGTTA
GAAGATGCGA TGGACATTCA GTCTGGTAAA GGTATCCAAT TAGGACCAAA AAACTATTTA
GGTCATGCTT ATATGGCAAC ACCTATTTCA ATTACCGTTG AAGGTGCAAA CATCCTCACT
CGTTCATTGA TGATTTTTGG TCAAGGTGCA ACCCGTTGTC ATCCATATGT TTTGGCTGAA
ATGGAAGCCG CTGCAATGGA AGATGAAACT TCTGCATTAG ATCGTTTCGA TTCATTATTG
CTCGGTCACA TTGGTTATGC GATGGGTAAT GCATTACGTT CATTTGGTAG TGCACTAACA
GGCAGCCGTT TCGCCAGTGC ACCAGTGAGT GGCCCAACGC AGCAGTATTA TCGTGACATG
ACGCGTATCT CTTCGTCACT TGCCATTATG ACTGATTTAT CGATGTTAAT TATGGGTGGG
GATCTTAAGC GTAAAGAAAT GATATCTGCA CGTATGGGGG ATGTACTAAG TCAGTTATAT
CTTGCATCTG CTACGTTAAA GCTGTTTGAA GATAACGGTC GTCAGCAAGA TGATTTACCA
GCCGTGCATT ATGTGATGAC TGAACGTTTA CATTTAGCGG CTAAAGCGCT TAATGACGCG
ATTCGTAATT TTCCGAGTAA AATCGCTGCT GTATTACTAC GAGTGTTGAT TTTCCCATTA
GGTAACCACT TCAATGCACC AAGTGATAAA TATGCAGTTG ATTTAGTCAA AGGTATGCTT
AAGCCTGGAC CCGCGCGTGA CCGCATTACT TTCCTTTGTG GAGAGTTTGA CGGTGACACT
AGCGGTATTG CTGAAGTTGA AAGTGCGTTC TTAGCTAAAT ATGCAGCGAA AGATTTGTAT
AAGAAGCTTA AGAAAGCACA ACGCAGCGGC CATATAAAAT CTAAACTTCC TATGCTTGAG
TTATTTGACG TGGCGTTAGA GAAAGACATT ATCACTGAAG CTGAGCATAA ACAGCTTGTT
GAGGCGGACG TATTACGTTT AGCTGCTATC AACGTGAATG ACTTTGAAGA ACTATAA
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| Protein sequence | MSIVILLVIA IIVLFGVRNI RMQFITRPVF SFFKKVLPPL STTEKEAMEA GDVWWEGELF
RGKPNWNTLH SYGKPTLSAD EQDFLDNQVN TALTMIDDFD IVHNRKDLPP ELWQYFKEQG
FFALIIPKKY GGREFSAYAN STIVAKIATR SVSAAVTVMV PNSLGPGELL THYGTQEQKE
RWLPSLAVGK DIPCFALTGP EAGSDAGAIP DIGVVCLREF EGEETLGLSL TWNKRYITLA
PVATVLGLAF QMRDPDGLLG DVKNIGITCA LIPTDHKGVE IGRRHNPLMM AFMNGTTSGE
DVFIPLDWII GGPQFAGKGW RMLVECLSAG RGISLPALAT ASGHVCTKTT TAYSYVRQQF
GMPIGLFEGV QEAMARIIAN TYQLEAARRL TTQGIDLKVK PSVVTAIAKY HMTELGRDVL
EDAMDIQSGK GIQLGPKNYL GHAYMATPIS ITVEGANILT RSLMIFGQGA TRCHPYVLAE
MEAAAMEDET SALDRFDSLL LGHIGYAMGN ALRSFGSALT GSRFASAPVS GPTQQYYRDM
TRISSSLAIM TDLSMLIMGG DLKRKEMISA RMGDVLSQLY LASATLKLFE DNGRQQDDLP
AVHYVMTERL HLAAKALNDA IRNFPSKIAA VLLRVLIFPL GNHFNAPSDK YAVDLVKGML
KPGPARDRIT FLCGEFDGDT SGIAEVESAF LAKYAAKDLY KKLKKAQRSG HIKSKLPMLE
LFDVALEKDI ITEAEHKQLV EADVLRLAAI NVNDFEEL
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