| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1860 |
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| Symbol | |
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| ID | 4278320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2198881 |
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| End bp | 2200050 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638134643 |
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| Product | putative AcnD-accessory protein PrpF |
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| Protein accession | YP_750546 |
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| Protein GI | 114563033 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2828] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR02334] probable AcnD-accessory protein PrpF |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCATT TACCACAAAT GAAAATTCCA GCGACTTATA TGCGCGGCGG CACCAGTAAA
GGGGTTTTTT TCAGCTTAAC TGACTTGCCT GCGGCTGCTC AAGTGGCAGG CGCAGCCCGC
GATGCAATAT TATTGCGGGT TATTGGCAGT CCCGATCCTT ACGGTAAACA CACCGATGGG
ATGGGTGGAG CAACGTCAAG TACCAGTAAA ACGGTTATCT TATCTAAAAG TACTCAAGCT
GATCACGATG TTGACTATTT ATTTGGTCAA GTATCGATTG ATAAGCCGTT TGTTGATTGG
AGCGGCAACT GCGGTAATTT AACTGCAGCG GTGGGTTCAT TTGCCATTAG TAATGGTTTA
ATCGATCCAA GCCGAGTGCC TGAAAATGGC ACCGCAATCG TGCGTATTTG GCAAGCCAAT
ATTCATAAAA CCATTATTGC TCATGTCCCT ATTACCAACG GCGAAGTGCA AGAAACCGGT
GATTTTGAAC TTGATGGTGT GACGTTCCCC GCAGCTGAAG TGCAAGTAGA GTTTTTAGAC
CCTGCTGATG GTGATGGTGC TATGTTTCCT ACTGGTAACG TGGTTGATGA ACTTAACGTA
CCTGGCGTAG GGACCTTTAA AGCGACCATG ATCAATGCGG GCATTCCAAC GATTTTTATT
AATGCTGCCG ATATTCAGTA TCAAGGTACT GAGTTGCAAG ATGACATTAA TAATGACGAT
AAAGCCTTAG CCATGTTTGA AACCATTCGG GCTTATGGTG CAGTAAAAAT GGGCTTAATT
AAGCATATTG ATGAAGCGGT AGCCCGTCAA CATACCCCTA AAGTGGCTTT TGTTGCACCT
GCTGCGAATT ATATTTCTTC CAGTGGCAAA GCGGTTAATA CTGATGATAT CGATCTGGTC
GTGCGGGCAT TGTCTATGGG TAAATTGCAC CATGCGATGA TGGGCACTGC TGCGGTGGCG
ATTGGCACTG CTGCTGCGAT TCCTGGCACA TTAGTTAATT TAGCTGCTGG CGGCGGTGAG
CTGAGTGCAG TTCGTTTCGG CCATCCATCT GGCACTTTAC GTGTAGGTGC GCAAGCAGCA
TTAGTACAAG GTCAATGGCA AGTTAAAAAA GCCATTATGA GCCGAAGTGC GCGAGTATTA
ATGGAAGGTA AGGTGAGCAT TCCACAATAA
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| Protein sequence | MAHLPQMKIP ATYMRGGTSK GVFFSLTDLP AAAQVAGAAR DAILLRVIGS PDPYGKHTDG
MGGATSSTSK TVILSKSTQA DHDVDYLFGQ VSIDKPFVDW SGNCGNLTAA VGSFAISNGL
IDPSRVPENG TAIVRIWQAN IHKTIIAHVP ITNGEVQETG DFELDGVTFP AAEVQVEFLD
PADGDGAMFP TGNVVDELNV PGVGTFKATM INAGIPTIFI NAADIQYQGT ELQDDINNDD
KALAMFETIR AYGAVKMGLI KHIDEAVARQ HTPKVAFVAP AANYISSSGK AVNTDDIDLV
VRALSMGKLH HAMMGTAAVA IGTAAAIPGT LVNLAAGGGE LSAVRFGHPS GTLRVGAQAA
LVQGQWQVKK AIMSRSARVL MEGKVSIPQ
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