Gene Sfri_1811 details

Gene Information

• Locus tag: Sfri_1811
• ID: 4277450
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: -
• Start bp: 2135612
• End bp: 2137489
• Gene Length: 1878 bp
• Protein Length: 625 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 638134596
• Product: cyclic nucleotide-binding protein
• Protein accession: YP_750499
• Protein GI: 114562986
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGCCG AAGTACTCGA AATTCAGAGC TTTATTGCTC AGTACGCCCC CTTTGATCAG 
CTTCCAGAAC AAGTCTTAAT TGACGTTGCC AAAAGTGTTG AGATTTCTTA TTACCGCACA 
GACAGCATGA TTGTTAACTT TAATGACAAC ATTAAAGAGC TTTATATGAT CCGCAGCGGA 
GTCGTAGAGT TATATCGCCG TAAAGGTGAA CTTTATAATC GTTTAGACCA AGGTCAGTTA 
TTTGGGCAAA TGGGCTTATT AACCAATAAT AAAGTACGTT TCCCCGCTAA AGCAGTAAAA 
GATACGCTGG TTTACTGTAT TCCTGAGTCT GTATTCAATG ACTTATGCGA GAATTATGAT 
GATTTTGCTG ATTTCGTTGA AGCTGAGGAT ACCACCCGTT TAAAACAAGC GGTAAAGGGT 
AAAACCGATG ATGCTAATGC ACTAACCACC TCAAAAGTGA AAACCTTAGT TACCAGAGAG 
CCTGTGGTTC TATCTTGCCA TAGCTCCATA CAAGTGGTGG CCAAAATAAT GGCCGAGCAA 
AACATTTCTG CGGTATTAAT AAATGACCCT GATATAGATG ATCAACAAGA TAGCAGTTTT 
GTGGGTATTA TTACCGAACA TGATCTCTGC GCTAAAGTCA TCGCTGCCGG AGTTAATGTA 
GATAATCCTA TTTCACAAGT CATGTCGACC AGTTTAATAT CGCTGGATCA TAACGCATAC 
ATTTTTGAAG CTATGTTGCT TATGCTGCGC AATAATATTG ATCATCTACC TATCTTAAAA 
AATAAAAAAC CGATTGGTCT TATTGAAGTT GCGGATATCA TTCGCTACGA ATCACAAAAT 
AGTTTGTTGT TTGTAAGCAG TATCTTCCAA CAAAATAGTT GCGAAGATTT AGTGCTACTT 
TCTGCGCAGT TAAAAAACTG CTTCGTACGC ATGGTTAATG AAGATGCCAA TTCACACATG 
GTCGGACGGG CAATGTCTGA AATTGGTCGT AACTTTAAAC AACGTTTGTT AGAACTAGCA 
GAAGAAAAAT TCGGCCCACC GCCTGTTCTT TATTGCTTTT TAGCACTGGG GTCGATGGCC 
CGTGATGAAC AGCTAATGGT GACCGACCAA GATAATGCCA TTATCCTTGA TAACAGCTAT 
AACGCTGCGT TACATGGTGA GTATTTTGCG AAGCTAGCAG ATTTTGTTTG CGATGGTTTA 
GCCGCCTGCG GTTATAGTTA CTGCACTGGT GATATTATGG CAAGCAACCC AGAATACCGT 
AAAACTCGTG CTCAATGGGA AGATTGTTTC GGTGATTGGA TAGAAAATCC TAACCCGCAA 
GCTTTATTAA ACTGCTCTAT TTTCTTTGAT CTTACCGGTG TTTATGGCCG AGTAAAATGG 
GCGGAACAGC TAAATGCATT TATCTTAAGT AAGGCCAAGA AAAACAACCG TTTTCTAGCC 
TGTTTAGCGC ACAATGCCCT CAACCGAAAA CCACCACTTG GATTCTTTAA AGATTTTGTG 
ATGGAAAAAG ATGGTCGTCA TAACAACTCT ATTAATTTGA AACGTCGTGG TACTGCACCA 
TTGGCAGATT TGATCCGAGT ACACGCATTA GCAATCGGCT CGCAATCGCA AAACTCATTT 
GAACGTTTAG AAGATATTAT CGACGCAGGC ATTCTGCCAA CATCAAAGGG CGAAGATTTA 
CAACATGCTA TGGAGCTTAT CTCTCTGGTA CGTTTACGTC ATCAATCAAC GGATATAGAG 
TCTGGGATTG AGCCTGATAA TAATATTGAA CCTGAAAGTA TGTCAGATTT TGAAAGACGA 
AATCTTAAAG ATGCCTTTTT AGTGTTAAGC AATGCGCAAA ACTTTTTAAA ATATCGCTAC 
AGTTCGAACA AACTTTAA 

 

Protein sequence

MTAEVLEIQS FIAQYAPFDQ LPEQVLIDVA KSVEISYYRT DSMIVNFNDN IKELYMIRSG 
VVELYRRKGE LYNRLDQGQL FGQMGLLTNN KVRFPAKAVK DTLVYCIPES VFNDLCENYD 
DFADFVEAED TTRLKQAVKG KTDDANALTT SKVKTLVTRE PVVLSCHSSI QVVAKIMAEQ 
NISAVLINDP DIDDQQDSSF VGIITEHDLC AKVIAAGVNV DNPISQVMST SLISLDHNAY 
IFEAMLLMLR NNIDHLPILK NKKPIGLIEV ADIIRYESQN SLLFVSSIFQ QNSCEDLVLL 
SAQLKNCFVR MVNEDANSHM VGRAMSEIGR NFKQRLLELA EEKFGPPPVL YCFLALGSMA 
RDEQLMVTDQ DNAIILDNSY NAALHGEYFA KLADFVCDGL AACGYSYCTG DIMASNPEYR 
KTRAQWEDCF GDWIENPNPQ ALLNCSIFFD LTGVYGRVKW AEQLNAFILS KAKKNNRFLA 
CLAHNALNRK PPLGFFKDFV MEKDGRHNNS INLKRRGTAP LADLIRVHAL AIGSQSQNSF 
ERLEDIIDAG ILPTSKGEDL QHAMELISLV RLRHQSTDIE SGIEPDNNIE PESMSDFERR 
NLKDAFLVLS NAQNFLKYRY SSNKL