| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1805 |
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| Symbol | |
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| ID | 4277444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2125820 |
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| End bp | 2126722 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638134589 |
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| Product | putative DNA-binding transcriptional regulator |
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| Protein accession | YP_750493 |
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| Protein GI | 114562980 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.524911 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTTCAG AACAAGCATT CGAGATGATA GATATTGTTG CCCGTGTGGG CAGTTTTACC
GCCGCAGCCA ATAAATTGAA TAAAGTCCCC TCTGCGGTGA GTTATGCCAT TAAACAGATT
GAAGATGACT TAGGGGTAAT ATTGTTTGAG CGTCACCATC GCAGTGTTAG TTTGACGCCA
GCCGGTGAAC ATTTTGTGGC GCAGTCACGC GAGATAATGA CCAAGCTTAA TAATATTAAA
CGTGATACCC AGAAAGTGGC TAATGGCTGG CGCCCTTCTT TATCTATTGC GATTGACAAC
ATGGTTCGCG CAGACAAAAT CAGTGGCTTA ATTGCTGATT TTTATCGCCA CTTTACCGAT
ATTGAATTGA TTATTCGCTT AGAAGTTTAT AATGGCGTGT GGGAAGCATT GTCGACGGGT
AAAAGCGATA TCGCTATAGG AGCAACCTCA AGCATTCCTG TTGGTGGCAC TTTTAAGTCG
CGCGATATGG GAATGATTCA GTGGTCTTTT TTAGTCGGTA AAAATCATCC GTTAGCCAAA
ACAGAACATG CGTTAACCGA TGACGAGTTA TTACAGTATC CGTCAATTTG CTTGCAAGAC
ACGGCTCATA ATATTGCCCA CAGGCCGAAT TGGTTGTTAA ATAACCAACG TAGAATTGTG
GTACCTGATT GGATCAGAGC AATAAATTGT TTTAGAGAAG GCTTAGGTGT GGGCTACATG
CCCTATCATT TGGCTGATAT TTTTATTAAA GCCGGCGCGC TAATAGAAAA ACAACTCGCC
ACCCCAAAGC AAGACACAGC CTGCTGTTTA GCCTGGAATA ATGCCAATAT GACGCCTGCT
ATGCAGTGGG TGTTAGATCA CCTCGGCGAC ACCGAGAAAC TAAAAAAAGA GTGGCTTAGC
TAA
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| Protein sequence | MLSEQAFEMI DIVARVGSFT AAANKLNKVP SAVSYAIKQI EDDLGVILFE RHHRSVSLTP
AGEHFVAQSR EIMTKLNNIK RDTQKVANGW RPSLSIAIDN MVRADKISGL IADFYRHFTD
IELIIRLEVY NGVWEALSTG KSDIAIGATS SIPVGGTFKS RDMGMIQWSF LVGKNHPLAK
TEHALTDDEL LQYPSICLQD TAHNIAHRPN WLLNNQRRIV VPDWIRAINC FREGLGVGYM
PYHLADIFIK AGALIEKQLA TPKQDTACCL AWNNANMTPA MQWVLDHLGD TEKLKKEWLS
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