Gene Sfri_1793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1793 
Symbol 
ID4277432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp2114600 
End bp2115736 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content44% 
IMG OID638134577 
Productalanine dehydrogenase 
Protein accessionYP_750481 
Protein GI114562968 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0686] Alanine dehydrogenase 
TIGRFAM ID[TIGR00518] alanine dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.00000000626319 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAATCG AGGCTCAAAT AATGATTATT GGTGTTCCAA CAGAAATCAA AAACCACGAA 
TACCGTGTAG GCATGGTCCC TTCAAGCGTA CGTGAATTAA CCATAAAAGG TCACGTTGTT 
TATGTTCAAT CAGATGCGGG TGTGGGTATT GGTTTTACCG ATCAAGACTA TATTGATGCG 
GGCGCCTCGA TTTTAGCTAC AGCAGCTGAA GTGTTTGCTA AATCAGACAT GATTGTAAAA 
GTTAAAGAGC CACAAGCAGT TGAACGTGCA ATGTTACGTC ACGACCAGAT TTTATTCACT 
TACTTGCACC TTGCACCAGA TTTGCCACAA ACTGAAGAAT TAATCACCAG TGGCGCTGTT 
TGTATTGCTT ACGAAACAGT CACTGATGAT CGCGGCGGAT TACCATTACT TGCCCCAATG 
TCAGAAGTTG CTGGCCGCAT GTCAATCCAA GCAGGTGCTC GCGCACTTGA AAAATCATTA 
GGCGGCCGTG GTATGTTGCT TGGAGGTGTT CCAGGTGTTG AGCCAGCTAA AGTGGTCATC 
ATTGGTGGCG GTATGGTTGG TACAAACGCA GCACAAATGG CTGTTGGTAT GGGGGCTGAT 
GTTGTTGTTT TGGATCGCAG TATCGATGCA TTACGTCGTC TAAATGTTCA ATTTGGTTCA 
GCGGTTAAAG CTATTTACTC AACAGCTGAT GCTATTGAGC GCCACGTATT AGAAGCTGAC 
CTTGTTATTG GCGGTGTATT AGTTCCTGGT GCTGCAGCAC CAAAGTTAAT CACTCGTGAC 
ATGGTTAAGC GCATGAAACC TGGTAGTGCA ATTGTTGACG TTGCAATTGA CCAAGGTGGT 
TGTGTTGAAA CATCGCACGC TACCACTCAC CAAGACCCTA CTTACATTGT TGATGACGTA 
GTGCATTACT GTGTGGCTAA CATGCCAGGT GCAGTAGCGC GTACTTCTAC GTTTGCATTA 
AACAATGCAA CACTACCTTA CATTATCAAG TTAGCTAACC AAGGTTACAA ACAAGCATTA 
TTAAATGACA AACATTTATT AAATGGCTTA AACGTAATGC ACGGTAAAGT GGTCTGTAAA 
GAAGTGGCTG AAGCGTTGAA CCTTGAGTTC ACTGAACCAA AAAGCCTACT TGCTTAA
 
Protein sequence
MSIEAQIMII GVPTEIKNHE YRVGMVPSSV RELTIKGHVV YVQSDAGVGI GFTDQDYIDA 
GASILATAAE VFAKSDMIVK VKEPQAVERA MLRHDQILFT YLHLAPDLPQ TEELITSGAV 
CIAYETVTDD RGGLPLLAPM SEVAGRMSIQ AGARALEKSL GGRGMLLGGV PGVEPAKVVI 
IGGGMVGTNA AQMAVGMGAD VVVLDRSIDA LRRLNVQFGS AVKAIYSTAD AIERHVLEAD 
LVIGGVLVPG AAAPKLITRD MVKRMKPGSA IVDVAIDQGG CVETSHATTH QDPTYIVDDV 
VHYCVANMPG AVARTSTFAL NNATLPYIIK LANQGYKQAL LNDKHLLNGL NVMHGKVVCK 
EVAEALNLEF TEPKSLLA