| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1734 |
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| Symbol | |
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| ID | 4277513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2042108 |
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| End bp | 2043220 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638134518 |
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| Product | ribonuclease D |
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| Protein accession | YP_750422 |
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| Protein GI | 114562909 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0349] Ribonuclease D |
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| TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTAACGT TTGAATATAT CAGTGATGAT GCCAGCCTGT TGTCATTAGT TGAACAATAC
CAACAAAGCA CCTTACTGGT GCTAGATACT GAGTTTGTCC GCACTCGAAC CTATTATGCT
AAATTAGGCC TTATTCAAGC CTATGATGGC AAAACTTTAG CCTTAATTGA TCCGGTTGCG
ATTACCGATT TAAGCCCATT TTGGCAGTTA TTAACTGACC AAAATATTGT CAAATTAGTG
CATTCATGCA GTGAAGATCT CGAAGTATTT GCTCATTACG GTGAATGCCA GCCAAGCCCA
CTATTTGATA GCCAAATAGC TGCAAGCTTT GCTGGTTTAG GCCACGGTTT AGGTTATGCC
AAGCTGGTTG ACGCATGCTT GCAAGTCGAA ATAGATAAAG GTGAGTCACG CACGGATTGG
ATGAATCGTC CGCTTTCTGA TGCACAATTA CAGTATGCGG CTAATGATGT GTTTTACTTG
TATCAATTAT ACCCACAGCT GCAACAGAAG CTTGCTGCAG ATAATCGTGT TGAATGGTTG
TTTGAAGAAG GTCAGCGTAT GACCGAAGGG CGCATGTCAT TGCCAGCAGG CGACAGCGTC
TACCTTAAAG TTAAAAATGC GTTTCAACTA TCGAGTCAGC AGCTAGCCTA TTTAAAAGTA
TTGGCTAAAT GGCGTTTAGC CAAAGCGGTA AGCCGTAATC TTGCGCTAGG TTTTGTTGTA
AAAGACCATG CATTAATTGC ATTAGCCAAA AAACAACCAA CCACATTAGC GGAATTGAAT
AGTTTAAATG ACTTAACAGA TCAAGAGAAA CGTATTCACG GCAAAGATTT ATTAACGGTT
ATGGCGACGG CAGATTTAAT TAATCTCCCT GAAGAAGTTG ATGTTGTGGC GCTTAAGTCT
GGTTATAAAT CAGCTTTTAA AGAAGTAAAA ACAGTCTTAA CTGAATTATG TGAGCGTGAA
AACGTCGCAT TAGAATTTGT TGGTTCTAAA CGCCATATTC ATGAATTTCT ATTATGGTTA
TACCATAACA AGCAAACACC AACACCGATA CTCTTGGTTG GTTGGCGTGG GCAGTTGGTA
GGTGATTTAC TAGAGCCAGT TCGCTTTAGT TAA
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| Protein sequence | MLTFEYISDD ASLLSLVEQY QQSTLLVLDT EFVRTRTYYA KLGLIQAYDG KTLALIDPVA
ITDLSPFWQL LTDQNIVKLV HSCSEDLEVF AHYGECQPSP LFDSQIAASF AGLGHGLGYA
KLVDACLQVE IDKGESRTDW MNRPLSDAQL QYAANDVFYL YQLYPQLQQK LAADNRVEWL
FEEGQRMTEG RMSLPAGDSV YLKVKNAFQL SSQQLAYLKV LAKWRLAKAV SRNLALGFVV
KDHALIALAK KQPTTLAELN SLNDLTDQEK RIHGKDLLTV MATADLINLP EEVDVVALKS
GYKSAFKEVK TVLTELCERE NVALEFVGSK RHIHEFLLWL YHNKQTPTPI LLVGWRGQLV
GDLLEPVRFS
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