| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1727 |
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| Symbol | |
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| ID | 4277506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2034612 |
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| End bp | 2036537 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638134511 |
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| Product | helicase c2 |
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| Protein accession | YP_750415 |
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| Protein GI | 114562902 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGCTCTA CACTTACCCA ATCTGTAATC CATGAATTTA GCGATCGCGG CGCGTTAGCC
AAACATGTGC ATCATTACCA CCACCGACAA AGTCAGACCG ATATGGCCGT CGCGGTAAGT
GACGCTATTG CTAAAAAGCA TAATCTGATT TTAGAAGCTG GTACTGGTGT GGGTAAAACC
TATGCGTATT TAATTCCGGC CTTACTCAGC GGTAAACAAG TGGTTGTGAG TACTGGCAGT
AAAAACCTGC AAGAGCAGCT ATTTCTTAAA GATCTCCCTG CATTACTCGC CATGTTAGAT
GTACATGTAC CTATTGCATT ATTAAAAGGG CGTAACAATT ATTTATGTCA GTTACGCCTA
GAAAAACAAA TGCAAAATGC CAGTCAATTT AGCGAATATT ATATTGATGA CTTGCTAAAA
ATTAATCAAT GGGCACATTT GAGCAAAGAT GGCGATATCG GCAATTTAAC CTCGGTGGCA
GAGCATTCAG AAGTTATTCC TAGCGTAGTG AGCACTAAAG AAACCTGTAC GGGTAAAAAA
TGCGATCATT ATGATGTGTG TTTTACCCGT AAAGCACGTA TTAGAGCAAT GGAGGCCAAA
GTGGTGGTGG TTAATCACCA TTTATTTTTT GCTGACCGAT TGCTAAAAGA CACCGGATTT
GCCGAGTTAT TGCCAGATCC CGATGTGGTT ATTTTTGATG AAGCCCATTT GGTACCCGAT
ATTTGTATCA ATTATTTTGG CAGTCATATA TCCAGTCGCG AAATCGATCT GTTACTCAAT
GGCATCATCA AAATACATAA ACAGGTTATT CGTGACAGTA TTCAAATAGA GCAATTATCG
CAACGTGGGC TGGTGGCATT AAGTGATTGG CACAATGCGA TGTATGACAA TCAAGTGTCA
GATTGGCGTA AAGTGCTTGC CAATAAGCAA TTAGCAACCG TGTCATGGGC ATTACAACAA
TCATTAGCAG ATCTTGCGAA TGTGCTTCGC CATCATCTTG GCCGCGAAGA CCTGCTCGAT
TTAGCGTTTG AACAATTACA CGAGCTTGCT GAAAAGCTAC AAGACTATTT TGAATGCAAA
GACATGCAAG CGGCTTATAG TGTCGAGTTA GGCCCACGTT TTATCATGCT TCGGCTTAGC
CCCATTAATG TGGCCAAACA ATGCCAGCAG CTGTTTGATG CCAAAACCCG TTGGATTTTT
ACCTCGGCGA CCTTGCAAGT AAACCGAAGT TTAGGCCATT TTGCGACCGA GCTTGGCTTA
TCATCCGCGA AGCAAATTAT TTTAGACAGT CCGTTTGATT ACCCTAATCA AGCGGTATTT
TGTGTGCCGC GCCATTTAGG TAAAGTAGGG CAGTCGCAAC ATACAGTTAA ACAATTAGTT
GATGTGTGTG TTCAAGCTAT CAACGCCGCT CAAGGCCGTA CGTTCATATT GTTTACTAGT
CATCAAATGC TCGAACAAGT GGCATCCGCT TTACAAGGTA AAGTCGCTTA TCCATTATTG
GTACAAGGCC AAGCCAGCAA ACAAAGTTTA TTAAATAAAT TTAGACAATT AGGTAATGCA
GTGTTGCTCG GCACCAGCAG TTTTTGGGAA GGAGTCGATG TTCGCGGTAA GTTACTCAGC
TGCGTGATTA TCGATAAATT GCCGTTTGTA TCGCCAGATG ATGCTTTATA CAAAGCACGG
GCCGCTAATG CTGAACGCCA GGGACTTGAT CCCTTTAGCC ATATTTCTCT GCCACAAGCG
GTGATAAGTT TAAAGCAAGG AGTCGGGCGG CTAATACGTG ATGAAAAAGA TCGCGGTGTG
CTTATTTTGT GCGATAACCG TATCGTAAAT CGTGCTTATG GACAGGCGTT TATTAATTCG
TTGCCACCAA TGCAGCGCAC ACGTGACTTA GACCTAGCAT TACAATTTTT AAAACAAATC
CCTTAA
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| Protein sequence | MSSTLTQSVI HEFSDRGALA KHVHHYHHRQ SQTDMAVAVS DAIAKKHNLI LEAGTGVGKT
YAYLIPALLS GKQVVVSTGS KNLQEQLFLK DLPALLAMLD VHVPIALLKG RNNYLCQLRL
EKQMQNASQF SEYYIDDLLK INQWAHLSKD GDIGNLTSVA EHSEVIPSVV STKETCTGKK
CDHYDVCFTR KARIRAMEAK VVVVNHHLFF ADRLLKDTGF AELLPDPDVV IFDEAHLVPD
ICINYFGSHI SSREIDLLLN GIIKIHKQVI RDSIQIEQLS QRGLVALSDW HNAMYDNQVS
DWRKVLANKQ LATVSWALQQ SLADLANVLR HHLGREDLLD LAFEQLHELA EKLQDYFECK
DMQAAYSVEL GPRFIMLRLS PINVAKQCQQ LFDAKTRWIF TSATLQVNRS LGHFATELGL
SSAKQIILDS PFDYPNQAVF CVPRHLGKVG QSQHTVKQLV DVCVQAINAA QGRTFILFTS
HQMLEQVASA LQGKVAYPLL VQGQASKQSL LNKFRQLGNA VLLGTSSFWE GVDVRGKLLS
CVIIDKLPFV SPDDALYKAR AANAERQGLD PFSHISLPQA VISLKQGVGR LIRDEKDRGV
LILCDNRIVN RAYGQAFINS LPPMQRTRDL DLALQFLKQI P
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