| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1678 |
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| Symbol | |
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| ID | 4277704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1982575 |
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| End bp | 1984545 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638134463 |
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| Product | peptidase S14, ClpP |
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| Protein accession | YP_750367 |
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| Protein GI | 114562854 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGGTG CTGCCAATGG CGTGGTCGAA TTGATTTTAT ATGGCGATGT TGGCTGGGAT
TTTACCGCCA AACAAATCGC CACTGACCTA CGTGCAATGG GCAAAGTATC GCAAATTAAC
GCTTACATTC AATCGGGTGG CGGCGATGTG ATGGACGGCA TGGCCATTTA TAACATTCTC
GCGCGTTGGC CTTGCCAAAA GTCGATTTGT ATTGAGTCGG TTGCAGCTTC TATGGCCAGT
GTTATTTGCA TGGCATTCGA TACCGTGATT ATGCCGTCCA ATGCCTTTTT GATGATCCAT
AGCAATTGGG GCGGTGCCGT TGGTACTGCT GATGATTTAC GTGAATACGC GGACTTGCTC
GATAAGTGGC GCTCAAGTAT GGGCAAGGCT TATCAAGATA AAGCCGGCGG CAAGTTAAGT
GATGAACAGC TAGGACAATT TTTTAAAGAA GACACTTGGT TGTCTGCGCA AGAAGCGGTT
GATCTTGGGC TAGCAGATGA AGTGATAGAA CCGATGCAAA TGGCTGCATC AATTAATTTT
AAACGACTGA AGGACTTTAA TAATATGCCT AAAGCATTAC AAACCCTGCT AGCACAACAG
GGCAATATCG GTGCTACCAC CCCCAATTCG CCTGCGCCAG CAGCCATTAA TACACCAGCC
CCAGTAGCTT CGGTACCAGC ACCAGTTGCA CCGTCGCAAG CTGATATTCA AGCTGCTGCC
ATTACCTTTA ATGCAGAACG TATTACCGGT ATTAATGCCG CGTTTGCTAC GTTCCCGCAA
TTAGCTGAAC TTAAAAACAG TTGTATTGCT GATGCCAACA TCAACGCAGA CAAAGCCAAA
GACATGATTT TGGCTAAGCT TGGCGAAGGT GTCACGCCAT GCGCCGTACA GCCTAAAAGT
GTCATTATTC ATGCCAGCAA CGGTAACATT GTTGGTGACT CAATTCGTGC GCAATTAATG
GCTCGAGCAG GCCATGAAGC GGCACAAAAA GACAATGGCT ATGGTAGCTA TAACTTACGT
GAACTTGCTC GTGCATCATT AGCCGACCGC GGTATTGGTT GTGCCGGTAT GAACGTGATG
CAAATGGTGG GGTTAGCGTT TACTCATACC TCATCTGATT TCGGTAACAT CATGTTAGAT
GTGGCCAATA AGTCAGTATT AAAAGGTTGG GCTGAAGCGG CTGAAACCTT TGAACGTATC
GCTAAAAAAG GTCAGTTAAG TGACTTTAAA GTCGCGCATC GTGTTGGCAT GGGTGAGTTT
AAAAGCTTAC CAGAAGTGAA GGACGGAGCA GAGTACAAGT ACATCACTGT TGGTGACCAC
GCTGAAAAAA TTGCCCTAGC AACTTACGGC GGCATTTTCA CGTTAACACG CCAAACGGTT
ATCAACGATG ACATGGACAT GTTAATGGGC GTACCGATGA AAATGGGTAA AGCCGCTAAG
CGCACTATTG GTGATTTGTT CTGGGCCGTG TTAACCAAAA ACGCCAAAAT GAACGACGGC
AAAGCTTTGT TCCATGCCGA TCACGGCAAC TTAACATCGG GCGCACCAAG CGTTGAAGCG
TTCAGCATTG CGGCTGAGTT AATGGAATCG CAAATGATTG GCGAATCTCC ATTAAACATC
ATGCCAGCAT TTGCATTGGT ACCACCTAAC CTTAAGCGTG CAGTGCTGCA AATCATTCAA
TCAACGTCGG TTAAAGGCAC CGATGCAAAC TCAGGTATTG CTAACCCAAT CCGCGACTTT
GTTGAAGTAT TGTCAGAGCC TCGCTTAAAA GCGAAAAGCG ATAAAGAGTG GTATTTGTCA
GCCGCTCAAG GTGAAGACAC CATTGAAGTG GCTTACCTTG ATGGTATCGA CACGCCATAC
ATTGAGCAGC AACAAGGTTT CACCGTTGAT GGTGTAGCAA CCAAAGTGCG TATTGATGCC
GGTGTATCAC CACTTGATCA CCGTGGCTTG GTTAAATCAA CGGGTGTGTA A
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| Protein sequence | MKGAANGVVE LILYGDVGWD FTAKQIATDL RAMGKVSQIN AYIQSGGGDV MDGMAIYNIL
ARWPCQKSIC IESVAASMAS VICMAFDTVI MPSNAFLMIH SNWGGAVGTA DDLREYADLL
DKWRSSMGKA YQDKAGGKLS DEQLGQFFKE DTWLSAQEAV DLGLADEVIE PMQMAASINF
KRLKDFNNMP KALQTLLAQQ GNIGATTPNS PAPAAINTPA PVASVPAPVA PSQADIQAAA
ITFNAERITG INAAFATFPQ LAELKNSCIA DANINADKAK DMILAKLGEG VTPCAVQPKS
VIIHASNGNI VGDSIRAQLM ARAGHEAAQK DNGYGSYNLR ELARASLADR GIGCAGMNVM
QMVGLAFTHT SSDFGNIMLD VANKSVLKGW AEAAETFERI AKKGQLSDFK VAHRVGMGEF
KSLPEVKDGA EYKYITVGDH AEKIALATYG GIFTLTRQTV INDDMDMLMG VPMKMGKAAK
RTIGDLFWAV LTKNAKMNDG KALFHADHGN LTSGAPSVEA FSIAAELMES QMIGESPLNI
MPAFALVPPN LKRAVLQIIQ STSVKGTDAN SGIANPIRDF VEVLSEPRLK AKSDKEWYLS
AAQGEDTIEV AYLDGIDTPY IEQQQGFTVD GVATKVRIDA GVSPLDHRGL VKSTGV
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