Gene Sfri_1627 details

Gene Information

• Locus tag: Sfri_1627
• Symbol: ilvH
• ID: 4277286
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: -
• Start bp: 1937434
• End bp: 1937928
• Gene Length: 495 bp
• Protein Length: 164 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 638134412
• Product: acetolactate synthase 3 regulatory subunit
• Protein accession: YP_750316
• Protein GI: 114562803
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0440] Acetolactate synthase, small (regulatory) subunit
• TIGRFAM ID: [TIGR00119] acetolactate synthase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.800745
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTCGTA TAATTTCTGT ATTACTTGAA AACCAACCAG GCGCATTGTC ACGAGTAGTG 
GGATTATTTT CTCAACGTGG CTACAACATC GAAAGCTTAA CCGTTGCGCC AACTGAAGAT 
GTGACCTTGT CACGCTTAAA TATTACCGTG ATTGCCAATG AAAATATTCT TGAGCAAATT 
GAAAAGCAAT TGCACAAGCT TATCGATATT TTGAAAGTGG CTAACATCAC AGAATCAGCC 
TACATTGAAC GTGAAATTGC GTTGGTGAAA GTAAAAGCCC AAGGCGAACA ACGCGAAGAA 
GTGAAGCGAA CAGCAGATAT CTTCCGCGGT CAAATCGTTG ATGTTACGGC CAATCTATAT 
ACCATTCAAA TGGTTGGCAC CAGTGATAAA ATTGATGCGT TTATCCATGC TATTAGCGAC 
ACAACTAAGG TGATTGAAAT ATCACGTTCA GGCGTGGTCG GTTTAGCCAG AGGTGAAAAG 
TCAATGAGAG CCTAA 

 

Protein sequence

MRRIISVLLE NQPGALSRVV GLFSQRGYNI ESLTVAPTED VTLSRLNITV IANENILEQI 
EKQLHKLIDI LKVANITESA YIEREIALVK VKAQGEQREE VKRTADIFRG QIVDVTANLY 
TIQMVGTSDK IDAFIHAISD TTKVIEISRS GVVGLARGEK SMRA