| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1611 |
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| Symbol | |
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| ID | 4277270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1917217 |
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| End bp | 1918227 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638134396 |
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| Product | sugar-binding protein, putative |
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| Protein accession | YP_750300 |
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| Protein GI | 114562787 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.677108 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGGAGAT CACTTGTATT GTTTTTTTTC TTAACTCTAA CACTCATATC TTCTGTCCAT
GGAAAAGAAT GGAAACTCGC TGTGGTACCT AAATTTCATA GTGTTTTTTT TGATCAAAGC
AAAGCTGGCT GTATAGATGC CGCTGCTCAA ATAAAAGGCG TGGAATGCAT ATATCGTGGA
CCAGATATAA GTAATGTTAG GATGCAAGAT CAGGTAATAA ATCAACTGAT CGATGAAGGT
ATAGATGGTA TCGCTGTAGC CATTACACAA TCTAATTATC TCGTTAAAAA TAGCCTTAAC
AGAGCTAAAG AAGCCGGTAT CCCGATAATT ACCTATGACT CTGATATTGA GGCTTCAATC
AACGAAGACC CTAATAGTAT ACGCCTAGCC TATATAGGCA CTGACAATTT TGAATTGGGT
AAGTCATTAG GTGAAGAATT AAAAAAACAT CGGCCCAATG GCGGGACGCT AATAATGCAA
TCTGGGCGAC CGGATTCTCC CAATCTGAAT TTAAGACTGA TGGGGGTCCG TTCCGCATTA
TCGGGAAAAA TATACGATAA ACCTCCTGGA GAATTGCTTA ATAACGATTC AGGATGGACT
GAAGTTAGAG AACCTTTCTT TAATTTTGAT CAACTGGCTC AATCTGTTAA TCAAATGGAG
TCTGTAATGA AAGGTAAGCC TGTAAAAGCA GACTCTTTTA TTGCTGTTGG TGGTTGGCCG
CAAAATGACC AAGCACGTTA CCGTAAAATG ATTGCCCCGT ACCAGGCAAA AATTAATAAC
AACAAGATCA TCATTGTTAT TACGGATACA TCCTCTGAAC AATTAACGAT GTTGAAAGAT
AATCTTGTTC ATATCAATAT TGGTCAAGAC CCATATGAAA TGGGAAAACA AGCCATTTTG
ACGTTGTATA AAATTGTAAC AGAACAAAAA TATGACAAAA TAATTTACAC ACCTATCACA
TTTTGCACAC CAGAGAACGT TAATACATGT ACCAAGGTTT CGGGATTGTA A
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| Protein sequence | MGRSLVLFFF LTLTLISSVH GKEWKLAVVP KFHSVFFDQS KAGCIDAAAQ IKGVECIYRG
PDISNVRMQD QVINQLIDEG IDGIAVAITQ SNYLVKNSLN RAKEAGIPII TYDSDIEASI
NEDPNSIRLA YIGTDNFELG KSLGEELKKH RPNGGTLIMQ SGRPDSPNLN LRLMGVRSAL
SGKIYDKPPG ELLNNDSGWT EVREPFFNFD QLAQSVNQME SVMKGKPVKA DSFIAVGGWP
QNDQARYRKM IAPYQAKINN NKIIIVITDT SSEQLTMLKD NLVHINIGQD PYEMGKQAIL
TLYKIVTEQK YDKIIYTPIT FCTPENVNTC TKVSGL
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