| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1606 |
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| Symbol | |
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| ID | 4277265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1911452 |
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| End bp | 1913128 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638134391 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_750295 |
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| Protein GI | 114562782 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.016837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGCTA TAATGACAAA TGATAAACCG TGGCTAACAC AATATCCTGA GGATGTGCCC
ACAAAAATAG ATTCAAGTAT GTATAACAAT ATCAATGATT TGTTTAAAGA GTCTTTTAAT
GCGCATGCTA AAAAAGCAGC ATATATTAAT ATGGGACATA GCTTATCCTA TCAAGATCTC
GAAAGTAAAA GTAACGCTTT TGCTGCTTAT CTGCAATCTG AACTAAAAAT GAAAAAAGGC
GAACGAATCG CCTTGATGAT GCCTAATTTA TTGCAATATC CGATCACTAT TTTAGGTGCA
TTAAAAGCAG GACTCATTAT TGTCAATGTT AATCCACTTT ATACCCCTCG AGAATTAAAA
CACCAATTAC GAGACTCAGG GGCCAGTGCT ATTGTTGCCG TAACAAATTT TGGTAATAAC
CTTCAGCAAA TACTGCATGA GACTAACATT AAGCATGTTA TGTTAACCAA AATCGGAGAT
GAGTTAGCGA TGCATAAGCG CACATTGGTT AACTTTCTTA TCAAACATGT CAAAAAAATA
GTGCCTAAAT ATCATATTCC CGACGCTATT TCATTGCGTA GAGCATTAAC CGAAGGCAAG
AAACTTCCCT TTATTGATCC CCAAATAACA GTAGATGATT TAGCATATCT CCAATATACA
GGTGGAACGA CGGGGCCTGC GAAAGGGGCA ATGCTGACTC ATAGTAATAT TATTTCTAAT
GTTCTACAGG TTCATGCGCA TTTTAGCCCA AGAACCTTAT ATGATAAGGA ATATGCCGTA
ACCCCACTTC CGCTTTATCA TATTTTTGCC AACTCAGTGA GTATGATGTT TATGCTCTTT
CTCGGTGCAA CAAATTTACT CATTACCAAT CCAAGAGATA TAGATGGTTT CGTAGCAGAT
TTAAGTAAAT ATCCATTCAC AATGGTTTTT GGTTTAAATA CTCTTTTTAA TGGCCTAAAC
AATCATGCTG GTTTTCAAAA ATTAGATTTT AGTCACGCTC GTTTTACTAT TGCAGGTGGA
ATGCCGACGC AGAAACATAT TGCTGATCGT TGGCAACAAC TTACTGGAAT GCCTGTCATA
GAAGGTTATG GCTTAACTGA ATGTTCCCCA GTAGTCGCTG CAGGTACTCA TCAACAACAA
TCATTTATTT CTTCAATTGG TGTCCCTTTA CCCAGCACTG AACTACGTAT CGTTAATGAT
GAAAATGAAC CTTTAGGTCC TAACCAAATT GGTGAAATTC AAATTAGAGG CCCCCAAGTG
ATGAAAGGCT ATTGGCAACA AGAAGCCGAA ACCAATACTG TAATGCATGC AGGAGGGTGG
TTAAGTTCTG GCGATATAGG AAGAATGGAT GACGATGGAA TTTTTTATAT TGAAGACCGT
AAAAAAGATA TGATTCTAGT GTCGGGATTT AATGTTTTTC CAACTGAAAT TGAAGAAGTT
GCAACCCTTC ATCCTCACAT CATCGAAGCT GCGGCCATTG GCATTCCCGA TGACGCCACA
GGAGAAAAAG TTAAATTATT TATTGTACGC AAAGGTAATG TGACCGTTGG CGAAATAAAA
AAACATTGTA GAAAATATCT TACCGGTTAT AAAAACCCAA GGATAATCGA ATTTAGAGAT
GAATTACCAA AATCAAATGT TGGCAAGATC TTACGTCGAG AATTGCGAGA TTCATAG
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| Protein sequence | MMAIMTNDKP WLTQYPEDVP TKIDSSMYNN INDLFKESFN AHAKKAAYIN MGHSLSYQDL
ESKSNAFAAY LQSELKMKKG ERIALMMPNL LQYPITILGA LKAGLIIVNV NPLYTPRELK
HQLRDSGASA IVAVTNFGNN LQQILHETNI KHVMLTKIGD ELAMHKRTLV NFLIKHVKKI
VPKYHIPDAI SLRRALTEGK KLPFIDPQIT VDDLAYLQYT GGTTGPAKGA MLTHSNIISN
VLQVHAHFSP RTLYDKEYAV TPLPLYHIFA NSVSMMFMLF LGATNLLITN PRDIDGFVAD
LSKYPFTMVF GLNTLFNGLN NHAGFQKLDF SHARFTIAGG MPTQKHIADR WQQLTGMPVI
EGYGLTECSP VVAAGTHQQQ SFISSIGVPL PSTELRIVND ENEPLGPNQI GEIQIRGPQV
MKGYWQQEAE TNTVMHAGGW LSSGDIGRMD DDGIFYIEDR KKDMILVSGF NVFPTEIEEV
ATLHPHIIEA AAIGIPDDAT GEKVKLFIVR KGNVTVGEIK KHCRKYLTGY KNPRIIEFRD
ELPKSNVGKI LRRELRDS
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