Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1601 |
Symbol | |
ID | 4277993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 1904596 |
End bp | 1905348 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638134386 |
Product | integral membrane protein TerC |
Protein accession | YP_750290 |
Protein GI | 114562777 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0861] Membrane protein TerC, possibly involved in tellurium resistance |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.351996 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCGAAT GGATAGCAGA TCCGCAAGCA TGGGTGGCAC TTTTAACCCT GATAGCACTC GAGATTGTAC TCGGTATTGA TAATATTATT TTTATCTCGA TTGTGGTTGG AAAGTTACCT GTTCATCAAA GAGATAAAGC AAGACTCATT GGGATAGGTT TAGCGATGGT AGCTAGATTA GGTCTACTAT TAAGTTTATT TTGGATCATG GGGCTCGTAG AGCCTATTTT TACCTTGCTA GATAATGCTA TTTCAGGCCG TGATTTGATT TTAATTTTTG GCGGTTTATT TTTATTAGCC AAATCAACTC ATGAAATTCA TACGAGCTTT GATATTCCGA CCGAATCAAC TCATGGTGTT GCACAAGTTG GCTTTTACTC AGTGTTAATT CAGATCGCGA TTCTCGATAT TGTATTTTCA TTAGATTCAG TCATTACTGC TGTTGGCTTG GTTGATAATA TATCGATAAT GGTTATTGCT ATCGTTTTAT CTGTCATTGT GATGTTGTTT GCCGCCAAAC CAATCAGTAT ATTTGTTGAA GAAAATCCGA CGATTAAAAT GCTCGCATTG TCATTTTTAT TGTTAATTGG ATTCACTTTA GTTGCTGAGG GTCTCGATTT CCATGTACCA AAAGGGTACA TCTATTTTGC AATGGCATTC TCGTTAACGG TGGAACTTAT CAACATAAAA ATCAAGAAGA GAAAAGAAAC TGGCACTATT CATCTCAATA AAAAAATGTC AGAAAATGAC TAA
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Protein sequence | MFEWIADPQA WVALLTLIAL EIVLGIDNII FISIVVGKLP VHQRDKARLI GIGLAMVARL GLLLSLFWIM GLVEPIFTLL DNAISGRDLI LIFGGLFLLA KSTHEIHTSF DIPTESTHGV AQVGFYSVLI QIAILDIVFS LDSVITAVGL VDNISIMVIA IVLSVIVMLF AAKPISIFVE ENPTIKMLAL SFLLLIGFTL VAEGLDFHVP KGYIYFAMAF SLTVELINIK IKKRKETGTI HLNKKMSEND
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