Gene Sfri_1601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1601 
Symbol 
ID4277993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1904596 
End bp1905348 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content36% 
IMG OID638134386 
Productintegral membrane protein TerC 
Protein accessionYP_750290 
Protein GI114562777 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0861] Membrane protein TerC, possibly involved in tellurium resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.351996 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGAAT GGATAGCAGA TCCGCAAGCA TGGGTGGCAC TTTTAACCCT GATAGCACTC 
GAGATTGTAC TCGGTATTGA TAATATTATT TTTATCTCGA TTGTGGTTGG AAAGTTACCT
GTTCATCAAA GAGATAAAGC AAGACTCATT GGGATAGGTT TAGCGATGGT AGCTAGATTA
GGTCTACTAT TAAGTTTATT TTGGATCATG GGGCTCGTAG AGCCTATTTT TACCTTGCTA
GATAATGCTA TTTCAGGCCG TGATTTGATT TTAATTTTTG GCGGTTTATT TTTATTAGCC
AAATCAACTC ATGAAATTCA TACGAGCTTT GATATTCCGA CCGAATCAAC TCATGGTGTT
GCACAAGTTG GCTTTTACTC AGTGTTAATT CAGATCGCGA TTCTCGATAT TGTATTTTCA
TTAGATTCAG TCATTACTGC TGTTGGCTTG GTTGATAATA TATCGATAAT GGTTATTGCT
ATCGTTTTAT CTGTCATTGT GATGTTGTTT GCCGCCAAAC CAATCAGTAT ATTTGTTGAA
GAAAATCCGA CGATTAAAAT GCTCGCATTG TCATTTTTAT TGTTAATTGG ATTCACTTTA
GTTGCTGAGG GTCTCGATTT CCATGTACCA AAAGGGTACA TCTATTTTGC AATGGCATTC
TCGTTAACGG TGGAACTTAT CAACATAAAA ATCAAGAAGA GAAAAGAAAC TGGCACTATT
CATCTCAATA AAAAAATGTC AGAAAATGAC TAA
 
Protein sequence
MFEWIADPQA WVALLTLIAL EIVLGIDNII FISIVVGKLP VHQRDKARLI GIGLAMVARL 
GLLLSLFWIM GLVEPIFTLL DNAISGRDLI LIFGGLFLLA KSTHEIHTSF DIPTESTHGV
AQVGFYSVLI QIAILDIVFS LDSVITAVGL VDNISIMVIA IVLSVIVMLF AAKPISIFVE
ENPTIKMLAL SFLLLIGFTL VAEGLDFHVP KGYIYFAMAF SLTVELINIK IKKRKETGTI
HLNKKMSEND