| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1583 |
|---|
| Symbol | |
|---|
| ID | 4277975 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | - |
|---|
| Start bp | 1887185 |
|---|
| End bp | 1888699 |
|---|
| Gene Length | 1515 bp |
|---|
| Protein Length | 504 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638134368 |
|---|
| Product | anaerobic nitric oxide reductase flavorubredoxin |
|---|
| Protein accession | YP_750272 |
|---|
| Protein GI | 114562759 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0426] Uncharacterized flavoproteins
[COG1773] Rubredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.652829 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAATTC ACATTAAAAA TAACATCGAT TGGGTTGGAC AGCGTGACTG GGAAATATTG
GACTTTCATG GCACTGAATA TAAAACCACT AAAGGGACGA GTTATAATAG TTACCTTATC
CGTGAACAAA AAAATGTCTT AATCGATACT GTTGACCATC GTTTCAGCCT GCAATTTATT
CAAAACCTTG AGATGGAAAT TGATCTCGAT AAGATTGATT ACATCGTCAT TAACCATGCA
GAAGAAGATC ACTCAGGTGC GTTAGCAGCT TTGATGGCTA AAATCCCTAA TACGCCAATT
TATTGTACCG AAAATGCTAT CGACTCCATT ACTGGCTTAC ACCACCATAC CGAGTGGAAT
TTTAATATCG TTAAAACCGG CGATACTCTT GATATTGGTA ATGGCAAGCA GTTGGTGTTT
ATTGAAACCC CAATGTTGCA TTGGCCAGAC AGTATGATGA CCTATTTAAC GGGAGATGCT
GTGCTATTTA GTAATGATGC GTTCGGTCAG CATTATTGTG ATGAGCATTT ATTTAATGAT
GAAGTAGACC AAATTGAATT AATGGATCAG TGTTTACGTT ATTACTCCAA TATTCTAACC
CCGTTTAGCT CACTGGTTAC CGCTAAAATT AATGAGGTGC TGAGTTTTAA CCTGCCCGTT
GACATGATTG CTACTGCCCA TGGCGTGGTG TGGCGCGACA ACCCTACCCA GATTATTCAT
CAATATCTGC AATGGGCAGA TAATTATCAA GAAGACAGAA TCACCATTTT TTACGATTCA
ATGTCTAATA ACACCCGTAT GATGGCCGAT GCCATTGCCC AAGGGATCCA CGACGTTGAC
CCGGTGGTGT CAGTTAAAGT GTTTAATGTG GCCCGCCATG ATAAAAATGA CATCTTAGCT
AACGTGTTCC GCTCTAAAGG TATTTTGGTG GGTTCATCAA CCATGAACAA TGTCATGATG
CCAAAAGTCG CGGGCATGTT AGAAGAGATC ACAGGCTTGC GCTTTAAAGA TAAGAAAGCC
GGTGCATTTG GAAGTTATGG TTGGAACGGC GGCGCGGTTG ACCGTATTCA CACCCGTCTT
ACGGATGCCG GATTTGAAAC CATTGTCGGT TTAAAAGCAA AATGGCGACC AGATGGTAAA
GCGATGCGCG AATGCCGTGA GCATGGTCGC CAGATAGCCA AAAGCTGGGC ATGGCATGAT
TTAAGTAATG TAAAATCCAT TTCACCTGCA TCGCTAGCGA AGAGCGCTCA AGCCACTGTA
ACCACTAAGC CAACGCCAGC AGTTCAAACA ACTCAAGCAA TCAAACCGAC ATGTACAACA
GCGACAGCAA TGAGTGATTC ACAAAATATG CTCTGCACTG TGTGTAATTG GGTGTATGAG
CCAGTATTGG GTGAGCCTAA TCAAGAAGTA GAACCAGGAA CACCGTGGAG CGAAGTACCA
GACTTTTTCC TTTGCCCAGA TTGTGGCCTT GGCAAAGATG TATTTGTCCC TATTGCTGAG
AGGAAAGCAT CATGA
|
|---|
| Protein sequence | MTIHIKNNID WVGQRDWEIL DFHGTEYKTT KGTSYNSYLI REQKNVLIDT VDHRFSLQFI
QNLEMEIDLD KIDYIVINHA EEDHSGALAA LMAKIPNTPI YCTENAIDSI TGLHHHTEWN
FNIVKTGDTL DIGNGKQLVF IETPMLHWPD SMMTYLTGDA VLFSNDAFGQ HYCDEHLFND
EVDQIELMDQ CLRYYSNILT PFSSLVTAKI NEVLSFNLPV DMIATAHGVV WRDNPTQIIH
QYLQWADNYQ EDRITIFYDS MSNNTRMMAD AIAQGIHDVD PVVSVKVFNV ARHDKNDILA
NVFRSKGILV GSSTMNNVMM PKVAGMLEEI TGLRFKDKKA GAFGSYGWNG GAVDRIHTRL
TDAGFETIVG LKAKWRPDGK AMRECREHGR QIAKSWAWHD LSNVKSISPA SLAKSAQATV
TTKPTPAVQT TQAIKPTCTT ATAMSDSQNM LCTVCNWVYE PVLGEPNQEV EPGTPWSEVP
DFFLCPDCGL GKDVFVPIAE RKAS
|
|---|
| |