Gene Sfri_1564 details

Gene Information

• Locus tag: Sfri_1564
• ID: 4277800
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: +
• Start bp: 1866785
• End bp: 1867231
• Gene Length: 447 bp
• Protein Length: 148 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 638134349
• Product: heat shock protein Hsp20
• Protein accession: YP_750253
• Protein GI: 114562740
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0071] Molecular chaperone (small heat shock protein)

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.403756
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTAATT TTAATATTTC TCCAGATTTA ACACCTCTTT ACCGTAGTGC AATTGGTTTT 
GATCGTTTAG CACAACTTGC TGAACATGCA GCAGCTAACA ATAGCAACAG TGGTTATCCT 
CCATATAATA TTGAGCTTTT AGGCGAAAAT CGTTATCGGA TCACCATGGC GGTAGCGGGT 
TTTTCTATGC CAGAACTCGA TATTATGAGT GAAGGTGAAA AGCTATTAGT AAAAGGTAAT 
AAGACTGCTA ACAGTGATGA ACGCAAATAT TTGCATCAAG GGATTGCTGA GCGTGGTTTT 
GAACGTAGTT TTCAATTAGC GGATTATGTG CGGGTCGTCG GTGCGGAATT AGAACACGGC 
TTATTAAATA TTGATTTAGT GCGTGAAATT CCAGAAGCTA TGAAACCTCG TAAAATAGAT 
ATTGTGACTA CCAAAACGCT TAGTTAA 

 

Protein sequence

MRNFNISPDL TPLYRSAIGF DRLAQLAEHA AANNSNSGYP PYNIELLGEN RYRITMAVAG 
FSMPELDIMS EGEKLLVKGN KTANSDERKY LHQGIAERGF ERSFQLADYV RVVGAELEHG 
LLNIDLVREI PEAMKPRKID IVTTKTLS