| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1548 |
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| Symbol | |
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| ID | 4277784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1843547 |
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| End bp | 1845394 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638134328 |
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| Product | cyclic nucleotide-binding protein |
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| Protein accession | YP_750237 |
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| Protein GI | 114562724 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGCCA GTGAGTTACA ACCAGTAGAA CAGTTTTTAG CGGCTCATTC GCCTTTCGAC
ACGCTACCTA AAGAGAGTAT TCAATATTGT GCTAGAAAGA TTAGCATCGG TTATTACAGT
AAAGCGTCTG CCTTTGTTGA GTTCGATAAA GACAATCCAA AATTGTACAT TGTTCGTAGC
GGTGCATTCG AAGTGCGTGA CCCTGAAGGT GTGTTGGTTG ACCGAGTTGG CGAAGGTGAG
TGTTTTGGTT TTTCCACCTT ATTATCGGGT GAAAAAGTGG TTAATAAAGT GGCTATTTTA
GAAGATGGTT TGGTTTATCA TTTACCACAA TCAGTCTTTG CCAAATTACG TTCCGAACAT
CGGAGCTTTG ATCAGTTTTT TGCCCGTGCT TTTGCTAAAC GCCTACGCAA TGAAACTAAA
TTTAGTGCTA AAGACTTGAC CACGACTAGC CGTATTACTT CCATCATGTC ATCTCAGCCT
ATTATCATCG ACGCTCACGC CAGTGTTATG GATGCGGCTA AATTAATGCG TGAACACCGG
GTTTCATCGG TGCTCGTTAT CGATAATCAA AAATTAACCG GTATTTTGAC CGATCGAGAT
TTACGTAATC GAATTATCGC AGAAGGCTTA GACGTCAATA CGCTGGTGAG TCAAGCCATG
ACCATCAATC CCGTGACAAC TCACGCCAAC GCGCTAGTGT TCGAAGCAAT GTTGGCGATG
AGTGAGCATA ATATTCACCA CTTACCTGTG GTTGATGGTA GCCGTGCATT AGGGATGATC
ACCAGTACTG ATATATTACG TTCGCAAAGT TCACAGCCCT TGCTGCTTAT TGGCGAAATA
GGGCGGCAAG GTAGTATCGA AAAGCTTATT CAAGTGAGTA AGCAAATTCC GTTACTATTG
CAAAATTTGA TCAGCGCAGA TGCTAGAGCA GAAGAAATAG GTAGGGTATT AACGTCGGTA
ACCGATGCAT TAACGCGTCG GCTAATTGAA TTGAATCAAC AAATTTTAGG TCAAGCACCA
ATGGCGTTTT GTTGGTTGGC TTTTGGTTCC CAAGGTAGGC AAGATCAAGT TGCTTGTTCT
GACCAAGATA ATGGTTTATT GCTGGCCCAC GACCCCGATG AGTTTGCCGC CGCTTATTTT
GAAGCATTAA CAAAAGCAGT ATGTAAGGGC TTAGATGAAT GTGGTTATAT TTATTGTCCT
GGTGACATTA TGGCGCAAAA CCCCAAATGG CGCTTATCAC TGGTGAAGTG GAAAGGGCTT
TTTTCAAGAT GGGTGAATAC GCCAGAACCA AAAGCCTTAA TGCATGCCAG TATATTTTTT
GATATGCGCC CAGTGTTTGG GCCATTGAGT TTATTCAGTG AACTGCAAGA TGATGTTTTA
GCATCTACAC AAAATAATGA TATTTTCCTT GCCGGAATGG CGGGCAACTC GTTAACTGAA
TCACCACCAT TGGGCTTTTT TAGGAAGTTT GTCCTTGAGC GTGATGGTAG TGAGGTGAAA
GGCATGGATT TAAAACACAA AGGAAGTGCA TTAATTAATG ACATTGCCAG AGTGTATGCC
TTAAGTGCTG GCATCAAAGA GGTTAATACT GCTAAGCGGA TCAGAGCGTT AATGGACGCT
AATATTATTA ATCGTAAAGA TGCACTTAAT TTGGCGGATG CCCATGAGTT CATTGCGCAC
ATGCGTTTAG CTAATCAAGG CTATCAAGCC ACCAATAACT TACCTGTGAA CAATTATCTA
AAACCACAAC ACCTTTCTTC ATTAATGCGC CATCAGCTTC GTGATGCATT CAAAGTAGTA
CATGATGCCC AAGCAGGTAT AAAACTTAAG TTCATGAGGA GCTTTTAG
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| Protein sequence | MDASELQPVE QFLAAHSPFD TLPKESIQYC ARKISIGYYS KASAFVEFDK DNPKLYIVRS
GAFEVRDPEG VLVDRVGEGE CFGFSTLLSG EKVVNKVAIL EDGLVYHLPQ SVFAKLRSEH
RSFDQFFARA FAKRLRNETK FSAKDLTTTS RITSIMSSQP IIIDAHASVM DAAKLMREHR
VSSVLVIDNQ KLTGILTDRD LRNRIIAEGL DVNTLVSQAM TINPVTTHAN ALVFEAMLAM
SEHNIHHLPV VDGSRALGMI TSTDILRSQS SQPLLLIGEI GRQGSIEKLI QVSKQIPLLL
QNLISADARA EEIGRVLTSV TDALTRRLIE LNQQILGQAP MAFCWLAFGS QGRQDQVACS
DQDNGLLLAH DPDEFAAAYF EALTKAVCKG LDECGYIYCP GDIMAQNPKW RLSLVKWKGL
FSRWVNTPEP KALMHASIFF DMRPVFGPLS LFSELQDDVL ASTQNNDIFL AGMAGNSLTE
SPPLGFFRKF VLERDGSEVK GMDLKHKGSA LINDIARVYA LSAGIKEVNT AKRIRALMDA
NIINRKDALN LADAHEFIAH MRLANQGYQA TNNLPVNNYL KPQHLSSLMR HQLRDAFKVV
HDAQAGIKLK FMRSF
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