| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1529 |
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| Symbol | |
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| ID | 4277484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1821946 |
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| End bp | 1822944 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638134309 |
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| Product | hypothetical protein |
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| Protein accession | YP_750218 |
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| Protein GI | 114562705 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0510] Predicted choline kinase involved in LPS biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.307734 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCCCAGC CGCTGTTATC TCTACCTATC GATGTGCTTA ATATAATCAG CAAAGCCATG
CCAACCACAT TGTTTCAACA GCTCGCTACA CAGTGTACCG AGGTGTCTTT TCTTAACACA
GGGATTAGCA ATGTTAATAT TAAGTTATCT TGTGAAGATG GAGATAAGGT TTTAAGAGTG
AATCAACCCC ACAGTAATTG GTGTGATAGA TCGCTTGAAG TTGAATGTTG GCAAGCCGCA
ATAGTGGCTA ACATTGCACC AGTATTGATT TGGGTCAGTG ATGATAAGCA AGTGTATCTG
AGTGAGTTTA TTCATCAACC AGAGACAGAC TGGTCGATAT TTGCCTCAAT GCGCAGTCAC
TTATCGCTTG GGCAATCTAC AAATCAATCC ATTTCGGCTG TCGACGCAGT TCCTTTGCTT
AGCGCCTTAT TCTGTAAACT CAGTACGCTG CCAGTGCCTA ATAAAAGTAT TACAGTGACT
GAGCAGTGGC AACAATACGC ATATCAATTG GATTCATTAA CTGAATCACA AATTGATCCG
CAATGGCATG ATGCGTGGCA GCAATTGTTA CGCTTAAATG GGCTTGTTCG GCACTGGTTA
TCGCAGTTAG AAGCCTGTGT GTTGCTGCCC ACTTTTTGTC ATCGAGATTT AACTCCGCAC
AATTTACTGC TTAGCGGCAG AGCCCCTCAT CAACTGTTTT GTATTGACTA TGAATATGCT
GTGGCGAGTC ATCCGTTGTT CGATTTAGCC AGCGTTGTGG CCAGCCATAA GTTATCAACG
ATACAAGTGA ACCAATTAAT CGATAACGTG ATTATGCAAT ATTGTCAGGC TGCTAGTCTT
ACCGATGTGG CAGCGGCAAA AGCTGCATTA CCCGCCGCAA TTAATTGTTT TTGGTTGTTT
TCAGCCATGT GGGCATTACT GATGGCAGCC AAAGAACCAC AAAAAGTCAC ACAATACTTA
CAATACTTTA CATATTACCT TACATTAATC ACTTGCTAA
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| Protein sequence | MSQPLLSLPI DVLNIISKAM PTTLFQQLAT QCTEVSFLNT GISNVNIKLS CEDGDKVLRV
NQPHSNWCDR SLEVECWQAA IVANIAPVLI WVSDDKQVYL SEFIHQPETD WSIFASMRSH
LSLGQSTNQS ISAVDAVPLL SALFCKLSTL PVPNKSITVT EQWQQYAYQL DSLTESQIDP
QWHDAWQQLL RLNGLVRHWL SQLEACVLLP TFCHRDLTPH NLLLSGRAPH QLFCIDYEYA
VASHPLFDLA SVVASHKLST IQVNQLIDNV IMQYCQAASL TDVAAAKAAL PAAINCFWLF
SAMWALLMAA KEPQKVTQYL QYFTYYLTLI TC
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