Gene Sfri_1523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1523 
Symbol 
ID4277478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1816983 
End bp1817492 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content46% 
IMG OID638134303 
Producthypothetical protein 
Protein accessionYP_750212 
Protein GI114562699 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTA ACAGTGATTT TTTCCCGTTA ACTGAAGTTG CTACACGCTT TGTCAACCAG 
TTGGCTCAGT GCCGTCGTTT AGGGCTTACT GTGCAAGAAG CCAGCGAGCA TCACGTGTTA
ATTGAGTTGC CTTACAGTCA AGATATTATT GGTTACCCAG ACACCGGAGT CATTCACGGT
GGGGTGATCA CAACCTTGAT CGATACCGCT TGTGGCACCG CAGTGGTATG CGCCATTTTG
AAAAAGTACC AATCGTTAGA GTTGTCTCCA ACATTGGATT TACGTGTCGA TTACATGAAA
CCTGCCGAGC CTCATAAGTC AGTTTATGCC TTTGCTGAAT GCTATCGTTT ATCGTCAAGC
GTTGCCTTTA CCCGCGCGAT AGCATACCAA GACAGCATTG ATGAACCTAT CGCTCACGCG
GTGGGATCTT TTATGCGCAT TAGTCCAGAA ATGGTCGGCG AAGAGTTTCG TCAAGTGTTA
ATGGGTAATT TACCGGGGGC GACATCATGA
 
Protein sequence
MKINSDFFPL TEVATRFVNQ LAQCRRLGLT VQEASEHHVL IELPYSQDII GYPDTGVIHG 
GVITTLIDTA CGTAVVCAIL KKYQSLELSP TLDLRVDYMK PAEPHKSVYA FAECYRLSSS
VAFTRAIAYQ DSIDEPIAHA VGSFMRISPE MVGEEFRQVL MGNLPGATS