| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1511 |
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| Symbol | |
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| ID | 4277466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1803001 |
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| End bp | 1804467 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638134291 |
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| Product | nitrite transporter |
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| Protein accession | YP_750200 |
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| Protein GI | 114562687 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2223] Nitrate/nitrite transporter |
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| TIGRFAM ID | [TIGR00886] nitrite extrusion protein (nitrite facilitator) |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGCTG ACAAATTTAA TCTGTTTTCT TTTCGCGGCA AGATGAAAAT CATGCATTTA
AGTTGGATGG CATTTTTTAT CACTTTTGTG GTGTGGTTTA ACGCTGCCCC ATTAGTGAGT
GTTATTGCTG ACAGTTTAGG GCTGACTACA GCTCAAATTA AAACACTGCT GATCCTCAAC
GTAGCTCTAA CGATCCCTGC GCGGATTATC ATTGGTATGG TGACCGACAA ATATGGTCCA
AGGATTACTT ATTCTGCCTT ACTAGGGATC TGTTCAATTC CTTGCTTTAT GTTCGCGGTA
GCCGACACCT TTGAGCAGTT AGCGTTAGCC CGATTTCTGA TTGGTTTTAT TGGTGCTGGT
TTTGTGGTTG GTATCCGTAT GGTGAGTGAA TGGTTTCCGG CTAAAGAGTT AGGTACAGCT
GAAGGCATAT ATGGCGGATG GGGTAACTTT GGTTCAGCTG CAGCAGCCTT TACTTTACCG
GCCGTTGCAC TTGCTTTTGG TGGCCCTGAC GGATGGCGCT ATGCGATTGG TATTACCGGT
TTAATGAGTT TGTTGTTTGC GTTTGTGTAT TACTTCAATG TGACTGATAC CCCAAAAGGT
TCGACTTACT TTAAACCTAA AAAGGGTGGC GGCTTAGAAG TCACCAGCAA AAGTGACTAT
GTGTTACTGA TCGTTATGAA GGTACCTATG TATGCCACGT TAGCGTTGTT AGGTTGGAAA
CTGTCTCCTG CTGGTGTGAG TATGTTTACT CAAGATGCAA CTTACCTTAT CTATCTTGGG
TTGGTGGTGG TGTTTTTGTT CGATTTTTAC CAAACGTACC AAGTGAACAA GCACTTGTTT
TCAATGGAAG TGCCTGAGTT TGAACGCTAT CAGTTTAAGC AAGTTGCTGT TTTGAATGTG
TTGTATTTCA CTACCTTTGG CTCTGAGCTT GCCGTGGTAT CTATGTTGCC ACTCTTTTTT
GCCGAAACGT TCGAGCTTGG CATGGCACAA GCCGGTATGT TGGCATCAAG CTATGCCTTT
ATGAACTTAA TGTCTCGTCC TGGCGGTGGC TGGTTAAGTG ATAAATTTGG TCGTAAAACG
ACCTTGTTAA TATTAACTGC AGGGTTAGCT ATTGGTTATT TATCGGTGGC ACAAATTGAC
TCGTCATGGT CATTGCCTTT GGCTGTAGCA GTCGTTATGG CATGCTCATT CTTTGTTCAA
GGTGGCGAAG GTGCTGTGTT TGCTGCAGTG CCGCTGATCA AGCGTCGTTT AACAGGGCAA
ATTGCTGGTA TGACAGGGGC TTATGGTAAT GTCGGCGCAG TGTTTTTCTT AACCGTATAT
TCCATCGTGT CTACTCAAAT CTTCTTTTAT GTGATTGCAG TAAGTGCCGT ATTTGGTTTT
ATTACTCTGT TCTTTATGAA TGAACCCAAA GGGCATATTG CTGAAGTCAA TGAACATGGC
GAAGTTACGT TAATCAGCGT AAGTTAA
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| Protein sequence | MSADKFNLFS FRGKMKIMHL SWMAFFITFV VWFNAAPLVS VIADSLGLTT AQIKTLLILN
VALTIPARII IGMVTDKYGP RITYSALLGI CSIPCFMFAV ADTFEQLALA RFLIGFIGAG
FVVGIRMVSE WFPAKELGTA EGIYGGWGNF GSAAAAFTLP AVALAFGGPD GWRYAIGITG
LMSLLFAFVY YFNVTDTPKG STYFKPKKGG GLEVTSKSDY VLLIVMKVPM YATLALLGWK
LSPAGVSMFT QDATYLIYLG LVVVFLFDFY QTYQVNKHLF SMEVPEFERY QFKQVAVLNV
LYFTTFGSEL AVVSMLPLFF AETFELGMAQ AGMLASSYAF MNLMSRPGGG WLSDKFGRKT
TLLILTAGLA IGYLSVAQID SSWSLPLAVA VVMACSFFVQ GGEGAVFAAV PLIKRRLTGQ
IAGMTGAYGN VGAVFFLTVY SIVSTQIFFY VIAVSAVFGF ITLFFMNEPK GHIAEVNEHG
EVTLISVS
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