Gene Sfri_1497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1497 
Symbol 
ID4278063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp1787280 
End bp1788239 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content44% 
IMG OID638134277 
Product3-oxoacyl-(acyl carrier protein) synthase III 
Protein accessionYP_750186 
Protein GI114562673 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.00000000406338 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACACAA AAATTCTCGG AACAGGTAGC TATCTACCTG TGCAAGTTCG TAGCAATCAA 
GATCTCGAAA AAATGGTTGA AACCAGTGAC CAATGGATTG TTGACCGAAC CGGTATTTCT 
GAGCGGCGCA TTGCTGCATC AGACGAATCG GTTTCAACAA TGGGTTATCA AGCGGCACTA 
AAAGCGCTTG AAATGGCAGG AATCGAAGCT AGCGATCTCG ATATGATTGT TTGTGGAACC 
ACCAGTGCAT CAAACGCATT TCCTGCAGCT GCATGCGAAA TTCAGGCCCT TTTAGGCGTC 
AAAAATATTC CTGCCTTTGA TATTGCTGCC GCGTGTTCTG GATTTATCTA TGCTTTATCG 
GTCGCAGATC AATTTGTAAA AACAGGTTCT GCTAAAAAAG TACTGGTTAT AGGTTCTGAC 
GTATTGTCAC GGATGTGCGA TCCTGCTGAT CGCTCTACCG TCATTTTATT TGGCGATGGC 
GCCGGCGCAG CGATTATTGG CGTTAGTGAT ACACCTGGTA TTATTGCTAC GCATATCTAT 
GCAGATGGCA GCCAAGGGGA TTTATTAAAA TGTTCTTTTC CTCCTCGAGC TAACGAAAGT 
TCTGAAGCTG TTGGCTTTAT GACCATGAAA GGCAACGATG TTTTTAAAGT TGCAGTTACC 
CAGCTGTCTA ATGTGGTCAC TGAAACCTTG CGTCTTAATA ATGTCGATAA ATCAGAAATT 
GACTGGCTAG TGCCGCATCA AGCTAATTTC CGCATTATTA ATGCTACGGC TAAAAAGTTG 
CACATGAGTC TAGATAAAGT CGTGCTGACT CTAGCTAGAC ACGGTAATAC TTCTGCCGCA 
TCGGTGCCTA TCGCATTAGA TGAAGCGGTG CGTGATGGTC GAATTCAGCG TGGACATTTA 
TTACTACTCG AAGCATTTGG CGGTGGTTTT GCTTGGGGCA GTGCTTTAGT TCGTTTTTAA
 
Protein sequence
MHTKILGTGS YLPVQVRSNQ DLEKMVETSD QWIVDRTGIS ERRIAASDES VSTMGYQAAL 
KALEMAGIEA SDLDMIVCGT TSASNAFPAA ACEIQALLGV KNIPAFDIAA ACSGFIYALS 
VADQFVKTGS AKKVLVIGSD VLSRMCDPAD RSTVILFGDG AGAAIIGVSD TPGIIATHIY 
ADGSQGDLLK CSFPPRANES SEAVGFMTMK GNDVFKVAVT QLSNVVTETL RLNNVDKSEI 
DWLVPHQANF RIINATAKKL HMSLDKVVLT LARHGNTSAA SVPIALDEAV RDGRIQRGHL 
LLLEAFGGGF AWGSALVRF