Gene Sfri_1480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1480 
Symbol 
ID4277576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1769383 
End bp1770294 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content39% 
IMG OID638134261 
Producthypothetical protein 
Protein accessionYP_750170 
Protein GI114562657 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.805933 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAGAA CTTTTTTTTG TATAGTGTTA TTGATATTAG GTACTCGAAC TGCCTCGGCA 
GAGACGAACC TATCAACTAA CGACTCAACA GTCTCCGACA AATATACTCT TGATGTCGGT
ATGTTTTATG CTAACTCCGA TTCAAACTTC ATCGTTACAA ACCCTAAAAC AGGTGGAACA
TTCCCAGTAG ATTTTGAAGA TGAACTTCTA CTTGCTGAAG AGCAATACTT ACCCTACTTT
GAATTCACAT TCTCTTTCAA CCAACGCCAT AATATTTATA TTGATTGGAA GTCGTTGGAT
CGCAAAGCCG ACACAGAAAC GGTATCACAA GATTTTATTC TTGAAGATAT TGATGGAAAA
GACTACCTGA TTGAAACTGG CGCTAAACTG AATACCGAAC TTAATATTGA TATTCTGCGA
ATTGGTTATG GTTATGACAT TTGGCAAGGT ACTCATTACG CTGTTGGAGT ATCCGTTGGT
ATACATACCA TGTTTATCGA AACCGCTTTT AAAGGCACTA TCGGTATTTG TGTCCCAGAT
TCAACCTTAA CCAGTTTATG CAGCAATGCA GTTGCCACAC CAGAAGTTAT CGACGACACT
CTAACGGCAC CTCTTCCAGA CATTGGTCTT TACGGCTCCT ACGAGTTTTA TCCTGGTTGG
ACATTTGATG CTCACGCCCA GTATTTTGCT ATCAAATATG ATGATGTAGA CGGATCACTG
ATCGATATCC GCTTAGGTGT TGAAGCTAAA ATTTGTGATA ATTGGTCATT AAAACTGGCT
TACAACTATT ATGATGTCGA TGTCACTATC GAAAAAACAC GTAATGTCGG TAATATTGAG
CAACGTACCT TTGATTACAA CATAAACTAC AGCTTTACTG GCCCAATGTT TGCGGTCTCT
TACGTTTTTT AA
 
Protein sequence
MIRTFFCIVL LILGTRTASA ETNLSTNDST VSDKYTLDVG MFYANSDSNF IVTNPKTGGT 
FPVDFEDELL LAEEQYLPYF EFTFSFNQRH NIYIDWKSLD RKADTETVSQ DFILEDIDGK
DYLIETGAKL NTELNIDILR IGYGYDIWQG THYAVGVSVG IHTMFIETAF KGTIGICVPD
STLTSLCSNA VATPEVIDDT LTAPLPDIGL YGSYEFYPGW TFDAHAQYFA IKYDDVDGSL
IDIRLGVEAK ICDNWSLKLA YNYYDVDVTI EKTRNVGNIE QRTFDYNINY SFTGPMFAVS
YVF