Gene Sfri_1463 details

Gene Information

• Locus tag: Sfri_1463
• ID: 4278467
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: +
• Start bp: 1747435
• End bp: 1747971
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 638134238
• Product: OmpA/MotB domain-containing protein
• Protein accession: YP_750153
• Protein GI: 114562640
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins
• TIGRFAM ID: [TIGR02802] peptidoglycan-associated lipoprotein

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.000000146392
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATCTGA ATAAGTTGTT TAAAGCTATG TTGGTTGCAG TTCCGCTTAT GGCACTGGGT 
GCCTGTAGCT CAACTTCAGA CTCTGAAACT GACGCTAACG GTTCTATGAG TGGTACTGGT 
AGTGAATACG GTAATGGTGG TATTGAAACT GGCGGTGTAG CTCCTGTACT AAGCTCTGCA 
GAACAGCAGC GTTTAAAAGA ACAAGAATTA CGTCGTCAAA ATATCATTTA CTTCGACTTT 
GACCGCAGTG AAGTTCAAAG TGAAAATGCT GAGATCATTC AAGCTCATGG TAACTACTTA 
GTTGAGCATC CAAATGTTCG AGTATTGATT GAAGGTCATG CTGATGAACG TGGTACGCCA 
GAATACAACA TCGCACTAGG CGAACGTCGT GCTAAAGCGA TTGCTAAGTA TTTACAAGGT 
ATGGGTGTAC AACCTAGCCA AATGAGCATC GTGAGCTACG GCGAAGAAAA GCCATTAGAT 
TATTCACGCA ACGATACTGG TTTTGCTAAA AACCGTCGTG GTGTGTTAGT TTACTAA 

 

Protein sequence

MDLNKLFKAM LVAVPLMALG ACSSTSDSET DANGSMSGTG SEYGNGGIET GGVAPVLSSA 
EQQRLKEQEL RRQNIIYFDF DRSEVQSENA EIIQAHGNYL VEHPNVRVLI EGHADERGTP 
EYNIALGERR AKAIAKYLQG MGVQPSQMSI VSYGEEKPLD YSRNDTGFAK NRRGVLVY