Gene Sfri_1445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1445 
Symbol 
ID4277262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1725570 
End bp1726604 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content45% 
IMG OID638134220 
Productpeptidase T2, asparaginase 2 
Protein accessionYP_750135 
Protein GI114562622 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1446] Asparaginase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAT TATATTTAAC GATAGCGCTA TGTTTAAGCT TAACGTCGAA TACCTGTTTT 
GCTAAAGACG ATACACCTTT TGCTATAGCA ATCCATGGCG GCGCCGGCAC TATTTCAGCT
GCTAGCCTGA GCCCTGAGCA AGAGAAAGCC ATTCGCGACA AACTTAAACA GGCAGTTGAT
GCCGGATATA AAGTGTTAGA TAAAGGCGGC GACAGCCTCG ATGCGGTTCA ATCTGCGATA
AATGTGTTAG AAAATAGCCC ATTATTTAAT GCTGGGGTTG GCGCTGTTTA TACTTTTGAT
GGTGGCCATG AACTTGATGC CTCAGTTATG GACGGTAACA CTATGAATGC AGGTGCCGTC
GCTGGGGTTA AACATATAAA AAACCCGATT GATTTGGCTA GAAAGGTAAT GGAAAAATCA
CCCCATGTGA TGCTTTACGG ACAAGGGGCA GAAGAATTTG CGTTAACCCA ACAATTTAGT
TTAGTGCCCA ACAGTCATTT TGATACCCCA CATCGTTATG CGCAGTTACT TGATGCTAAA
GCGAGTATCA TTGAAGCCGA GCAAAATAAC GGCGATGATT ATCAGGCGTC AGTGGCACAG
TTAACCGCCA ATTATAAATA TGGCACCGTG GGTGCTGTTG CACTTGATAA GCAAGGTAAC
CTTGCTGCAG GGACGTCAAC CGGCGGCATG ACAGCAAAAC GTTTTGGTCG TATTGGTGAT
TCTCCAGTCA TTGGCGCTGG AACGTATGCT GAAAATGGCG TATGTGCGGT ATCTGCAACT
GGGCACGGTG AGTATTTTAT TCGTTATCAG GTGGCGGGTG ACATATGCGC CAAAGTTAAA
TACCAACAAT TATCGATTAT TCAAGCGGCT GATGAAGTCA TTAATCAACG CTTAATATCA
GCTGGTGGAA CTGGAGGTGT GATAGCGATT GATCAGCGTG GCAATATAGC AACGCCATTT
AATACCGAAG GTATGTATCG TGCCACTCGA AGCCAAGGCC AAGCTGCGAC AATCATGATC
TGGCGTGATA AGTAA
 
Protein sequence
MNKLYLTIAL CLSLTSNTCF AKDDTPFAIA IHGGAGTISA ASLSPEQEKA IRDKLKQAVD 
AGYKVLDKGG DSLDAVQSAI NVLENSPLFN AGVGAVYTFD GGHELDASVM DGNTMNAGAV
AGVKHIKNPI DLARKVMEKS PHVMLYGQGA EEFALTQQFS LVPNSHFDTP HRYAQLLDAK
ASIIEAEQNN GDDYQASVAQ LTANYKYGTV GAVALDKQGN LAAGTSTGGM TAKRFGRIGD
SPVIGAGTYA ENGVCAVSAT GHGEYFIRYQ VAGDICAKVK YQQLSIIQAA DEVINQRLIS
AGGTGGVIAI DQRGNIATPF NTEGMYRATR SQGQAATIMI WRDK