| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1443 |
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| Symbol | |
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| ID | 4277260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1719680 |
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| End bp | 1723594 |
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| Gene Length | 3915 bp |
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| Protein Length | 1304 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638134218 |
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| Product | hypothetical protein |
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| Protein accession | YP_750133 |
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| Protein GI | 114562620 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2911] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGATA AACATACCGA GCAAAGTACT TTGCAACATA ATGAGCAAAA CGCTCAGTCA
GAAGAATCAC TCAAACCAAG TAATAAAAAG GCACCTAAAT CAACCAGTCT ATCTGCAAGA
ATTTGGCGCA GCATTAAGCT TTATACCCGA ATACTGATTT ATGTCCCATT GGTATTATTG
ATGTTGTTTG CCATCATCAT GGGCACCCCA TTTGGCAGTA AAATGGGGGT GATGTTCGTC
AATCAATTTA TCAGTGATAT CGATGTTGAA TATGCTTCTG GCACCTTAAA TGGTGATATC
ACGCTGCAGC ATTTGTCATG GTCAATGCCT GGGATTAGCG TCGAAGCTGA TGATTTAACA
TTGGAGTGGG TGCCAACATG TCTGATTAAC AAACAACTTT GTGTCACAAA TCTACTCGCA
TCAAGTATTG ATGTGAACAT TATCACTGAT AATATTCCTG TAACCGAAAA CACCACTGAC
ACGGATGCTA CGAACCAACC TTTTACCGAG CTTGAATTAC CCATTGGCAT TAATATCAGC
CACGCCCAAT TGGCCAATAT TGATGTAGAT GTGAATGGTA TGACTTTTTA TGCCGACAAT
TTAACGACTC AAGCTATCTT GAATAGCGCT GGCCTTGTGG TTGAATCTCT CACCAGCCAG
GGGTTAGTCG TCAACATTCC AGATGCAACA TCAACAAACC AAACACGTTC TCAACCAAAT
AATAATGCAA CAAACCAAAC CGCCGATCCC AAAGAAACTT CATGGCCATT GGCTAACTTA
CCACAGGTAT TTATGCCTTT CCCTGTCAAT GTTAGACAGT TTAATGCCAC CGACAGTCAG
CTCATTATCG GCCAGCGCAA CGACCATTTT AGCCATATCG CGTTAGCGGC CAGTTTTCGT
CAATTTCAAC TTGGAATAAC CCAACTAGAC ATTCAACATG ATGATGGTGA TATTAGCGTT
ATCGGTGATA TTAGTTTACA TGAGCACTAC CCACTGACAT TAAAGCTACT AGCCAATGTC
GAAAACCTGC CTGAGTTGCC AGGGCTTCAA CAGCAACAAC TCCGTGTAGA TCTTACCCAA
GACTTAAGTC AATTAAATAT CAACGCCATC GCTAAAGGCG ATAGCCATTT CAATCTTGCA
GCAGACATTA ATCTCACCAC GCCGGCGCTT GAATACCAAG TAACACTTAC CAATGCCGCT
TTGCAATGGC CGTTAAAAAA TCCCCAGTAC ACCAGCAACA TTACCCACTT TACCAGTAAA
GGTAATATAA AAGACCAAGT GGCGCAGTTT GAAGGGCAAC TGACAACACC TTACCACCCT
ACTTTGGCGG TTATTGCAGA TGTTGTTAAC CACAATCAAA AGTTGACCAT CAATAAGCTC
AATTTACAAT CAATCGCGGG CAACCTAGAT CTAACTGGGC AGCTATCATA TAAAGATGAC
ATAACCTGGC AAGCCAATGT GCTTACCAAC GACATTCAGT TGCAATATAT TGATTATATT
AATCAGCAAA ATCCGATCAA AAGTAAATTC AGTGGCCATT TTAATAGCAC GGGCAGCATT
GCCGATAAGC AATGGCAAGT GGCCATTCAA GACGCCAATT TAACCGGTCG TTTAAATGGT
TACCCGCTGA ACCTACAAGG CGAGATTTCA TTAAATCAAG ATTTTGCGAT AAACGCGACA
AACCTGCAGG CCAATGCCCT TGGCGCTCAA TTAATCATTA ATGGTCAAGC CGACAAAACA
TGGGACATCG ATGCCGAACT TAGCGTTCCC GATGTCAGTC AGTGGCTAAA AGGCGGCCGC
GGTAATATTT TTGCAAAAGT TGATGTTACG GGTAATAGTG CCGACCCAAT TGTGGATATT
AATGCGCAAA TCAGTCAATT CAGTTACCAA GGAAGTAAAA TTGACAGCCT TGACTTGCTG
GCGAATTATC GACCTTATAC ACAGCATCAA TATCGGATAG AACTGCGTAA TAACAATCTT
GTATGGGACA GCTATAAGCT GACAGATATC GCATTCGTCA GTGAAGGCAA TCAACATCAA
CAACAAAGCA AACTCAATAC TCAAGGTGAT GTGGTCATCA ATACTCAAAT GACCAGTAGT
AGTAATATTG ATAAACAACA GTTCAATGCC ACATTAACAG AATTCAATAT CAGTAATGCT
CTTGGACAAT GGCAACAAGA TAAACACATA ACCGCAAGCT GGGATCAACT CAATAATCGT
GGCAGTGTGA GCCGTTTTTG CTTAGTGCAT CCACACAATA AATTGTGCTT AATCAATGAT
GTTAATTTAG GTCACACTGG CCAGGCTAAT ATTACTTTTA CCGGTAATCC CGGCAAAACA
TTGGCACCTG TGTTGTCTAA AAAAATCACC TGGAGCGGTG AAGCAGCGCT AACAACTCAA
GTTAATTGGG CTAAAGGTAA AAAGCCTACT GCAAATGTTC AGTTTACGCT TTTACCGGGA
AATATTAAGC TAAGTCGAGC CAAAAACAAC ACTATCAGCA TCGACTACCA GCAGTTACTA
TTTCAAGCAT CGCTTGATGA AAAACAAATT AATAGTTCAT TGAGTTTTGA TTCGTCCGGC
ATAGCAAGTT GGCAAAGTCA GCTGAGTGTC AACATCACGC CCGATCGCAC CTTACTAGGT
ACGATTAATG TTAATGAGCT TAATCTGGCG CCTTTTGGAG AGTTCTTCCC AAGGTTAGAA
ACCTTAGAAG GCATGTTGTC CAGTCGATTA AATTTATCCG GCACTCTTAT GGACCCGAGT
GTCTCGGGTA ATATTAAACT CAGTGACGGT GCATTTGCCT TATCCACTAA CCCAACATTA
ATCGATAAAC TGTACTTGTC ACTGGCTCTA GAAGGCCAAC AAGGACAACT CAATGGCCAA
TGGCATATGG GTGACGGACA AGTGACTACG ACAGGTACCC TCGCTTGGCC ACAAGGAAAG
TTTTGTGGTG ACATTGATGT CAAAGGTGAA AATTTAGCAG TAATTCAACC GCCAATGGCA
ATATTAAATG TCTCTCCAGA TATTAATATG ACCTTTGATG AGCAACTGTT TGCGATAAAA
GGCAAAGTTG ACGTGCCATC AGGACAAATA AAAATTACAC AGTTAGCAGA AGGAGGCGTT
GCGGTATCGA ACGATGTGGT ATTTAACGAT TCAGTGTCTG AACAAACCGT TAAAACCAGT
CCTTATGCCG TTACAGCCGA TTTAAATATC AGTGTAGGTA AACGTCTTAC TATTGATGGT
ATGGGTCTTA AAGGAAGGCT AGAAGGCGAT CTGATACTAA AACAACAAGC TTTTAAGCCT
CCCATGTTAT TTGGTGATAT TAAAGTCAAC AAAGGGACTT ATAAGTTTAT GGGACAAACC
TTAAGTATTA ACACTGGTGA AGTCCAATTT ATTGGCCCGA CAGAATTACC AAACCTAAAT
ATAGAAGCGA CTAGAGACAT TAAAGAGAGT GATATCACCG CCGGTGTTCG AGTCACGGGT
ACCCCAATGC GTCCAGTGGT TACCTTATTC TCTAATCCAG CAAAAGAGCA AGCTGAAGTG
CTTTCTTATA TTTTGACGGG TAAAGGCTTT ACCAGTACAA CCAACCAACA AAGTAACTCA
CTAATGATGG GCGCCGCCCT CAGTTTAGGC TCACAATTTG ATGGTGGAGC AATGAATAGC
ATTGGCAGTA CTGCAACGGG TCTAATTGAA AAGTTTGGAT TTTCGAATGT ACAACTTGAT
ACTAATGATG ACGGTAAAGT GGCCGTAAGT GGGTATATAG GTGAAGACTT AATGATTAAA
TATGGCGTGG GAGTATTTAA CCCCGGTTAT GAAATGACTG TGCGATATTA TTTGTTTTCA
CAATTATATT TGGAAAGCGT GTCGAGCACC TTAAGTCAAT CACTTGATAT CTACTATAGC
TTCGAAATCG ATTAG
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| Protein sequence | MIDKHTEQST LQHNEQNAQS EESLKPSNKK APKSTSLSAR IWRSIKLYTR ILIYVPLVLL
MLFAIIMGTP FGSKMGVMFV NQFISDIDVE YASGTLNGDI TLQHLSWSMP GISVEADDLT
LEWVPTCLIN KQLCVTNLLA SSIDVNIITD NIPVTENTTD TDATNQPFTE LELPIGINIS
HAQLANIDVD VNGMTFYADN LTTQAILNSA GLVVESLTSQ GLVVNIPDAT STNQTRSQPN
NNATNQTADP KETSWPLANL PQVFMPFPVN VRQFNATDSQ LIIGQRNDHF SHIALAASFR
QFQLGITQLD IQHDDGDISV IGDISLHEHY PLTLKLLANV ENLPELPGLQ QQQLRVDLTQ
DLSQLNINAI AKGDSHFNLA ADINLTTPAL EYQVTLTNAA LQWPLKNPQY TSNITHFTSK
GNIKDQVAQF EGQLTTPYHP TLAVIADVVN HNQKLTINKL NLQSIAGNLD LTGQLSYKDD
ITWQANVLTN DIQLQYIDYI NQQNPIKSKF SGHFNSTGSI ADKQWQVAIQ DANLTGRLNG
YPLNLQGEIS LNQDFAINAT NLQANALGAQ LIINGQADKT WDIDAELSVP DVSQWLKGGR
GNIFAKVDVT GNSADPIVDI NAQISQFSYQ GSKIDSLDLL ANYRPYTQHQ YRIELRNNNL
VWDSYKLTDI AFVSEGNQHQ QQSKLNTQGD VVINTQMTSS SNIDKQQFNA TLTEFNISNA
LGQWQQDKHI TASWDQLNNR GSVSRFCLVH PHNKLCLIND VNLGHTGQAN ITFTGNPGKT
LAPVLSKKIT WSGEAALTTQ VNWAKGKKPT ANVQFTLLPG NIKLSRAKNN TISIDYQQLL
FQASLDEKQI NSSLSFDSSG IASWQSQLSV NITPDRTLLG TINVNELNLA PFGEFFPRLE
TLEGMLSSRL NLSGTLMDPS VSGNIKLSDG AFALSTNPTL IDKLYLSLAL EGQQGQLNGQ
WHMGDGQVTT TGTLAWPQGK FCGDIDVKGE NLAVIQPPMA ILNVSPDINM TFDEQLFAIK
GKVDVPSGQI KITQLAEGGV AVSNDVVFND SVSEQTVKTS PYAVTADLNI SVGKRLTIDG
MGLKGRLEGD LILKQQAFKP PMLFGDIKVN KGTYKFMGQT LSINTGEVQF IGPTELPNLN
IEATRDIKES DITAGVRVTG TPMRPVVTLF SNPAKEQAEV LSYILTGKGF TSTTNQQSNS
LMMGAALSLG SQFDGGAMNS IGSTATGLIE KFGFSNVQLD TNDDGKVAVS GYIGEDLMIK
YGVGVFNPGY EMTVRYYLFS QLYLESVSST LSQSLDIYYS FEID
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