Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1366 |
Symbol | |
ID | 4276973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 1624131 |
End bp | 1625006 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638134141 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_750057 |
Protein GI | 114562544 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAGACA ACTTACTGCC ATTCAAAAGT CATTATTTAG ACCGTAACGG CAATAAACTA CATTACATAA ACGAAGGCCA AGGCGAGCCA GTCGTTATGG TGCACGGTAA TCCTAGTTGG AGTTACTACT ACCGTAATTT AGTGAGCGCG TTGAGCGATA AGCATCAGTG TATTGTGCCA GACCATATTG GTTGCGGCTT ATCAGACAAA CCCGATGATC CACAATACGA TTACACCCTA AAAAACCGTA TTGATGACTT AGAAGCCTTG CTTGACAGCC TTGATGTAAA ACAAAACATC ACCCTAGTGG TACACGACTG GGGCGGTATG ATTGGAATGG GCTTTGCGGC TCGTCATCCT GAGCGCATCA AACGCATTGT GTGTTTAAAC ACGGCAGCGT TTCATCTTCC TAAAACTAAG CCTTTTCCCT GGGCATTGTG GATTTGCCGC GAAACCTTAC TCGGTACCTT GTTGGTTCGT GGTTTAAATG CATTTTCATC AGCAGCCTCG TATGTGGGTG TTAAACGCAA ACCCATGTCT AAAGAAGTGC GTGAAGCTTA CGTAGCGCCG TTTGATTCGT GGAAAAACCG TATTTCGACC TTACGTTTTG TACAAGACAT TCCACTCAAA CCTGGCGACA GAAACTACGA CCTAGTGACT AGCATTGGCG ATAGCTTAAG CGAGTTTGCT GAAGTACCGA CATTGATTTG TTTTGGTTTA CAAGATTTTG TATTCGATAA GTATTTTTTA GAAGAATGGC GACAGCGAAT GCCTCACGCA ACGGTGCACG AGTTTGCTGA CTGCGGTCAT TACATCCTTG AAGATGCCAG CGATGAAGTG ATTGGCTTAA TTAAAGACTT TATCGCAAAA AATTAA
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Protein sequence | MLDNLLPFKS HYLDRNGNKL HYINEGQGEP VVMVHGNPSW SYYYRNLVSA LSDKHQCIVP DHIGCGLSDK PDDPQYDYTL KNRIDDLEAL LDSLDVKQNI TLVVHDWGGM IGMGFAARHP ERIKRIVCLN TAAFHLPKTK PFPWALWICR ETLLGTLLVR GLNAFSSAAS YVGVKRKPMS KEVREAYVAP FDSWKNRIST LRFVQDIPLK PGDRNYDLVT SIGDSLSEFA EVPTLICFGL QDFVFDKYFL EEWRQRMPHA TVHEFADCGH YILEDASDEV IGLIKDFIAK N
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