| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1360 |
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| Symbol | |
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| ID | 4276967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1618588 |
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| End bp | 1619283 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638134135 |
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| Product | transcriptional regulator PhoU |
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| Protein accession | YP_750051 |
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| Protein GI | 114562538 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0704] Phosphate uptake regulator |
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| TIGRFAM ID | [TIGR02135] phosphate transport system regulatory protein PhoU |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.465651 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATTTAA GTAAACACAT ATCAGGTCAG TTTAATGCTG AGCTTGATGA TATTCGTAAT
CGTGTATTAG CCATGGGCGG TCTTGTTGAG CGCCAGCTTG AGCAAGCATT GGATGCTCTG
GCAACACTTG ACTCAGAATT AGCGCAACAA GTGATTGAAG GCGATCATAA AGTCAATGGT
ATGGAAGTGG CTATTGATGA AGAGTGCACC CGTATTATTG CTAAGCGTCA ACCTGCTGCC
AGTGATTTAC GCTTAATTTT GGCTATTTCT AAAACCATTA CTGATCTTGA ACGTATTGGT
GATGCTTGTG TTCGTATTGC TAAAGCAGCG GTAGAAAAGC GCGCTAACAG TCAACAACCT
TTATTGGTGA GTATTGAAAA CATGGGGCGT CACGCCACAC GTATGTTGCA CTCAACGTTA
GATGCATTAG CACGTATGGA TGCCGACCAA GCATTTGAGT TACACAAAGA AGATGCGAAA
TTAGACAAAG AGTATGAAGG TATTATCCGT CAATTAATGA CTCATATGAT GGAAGATCCT
CGCTCAATCC CAGGTGTGTT AGACGTATTA TGGGCTGCGC GTGCGGTCGA GCGTGTCGGA
GACCGTTGTA AGAATATCTG TGAGTACGTG ATTTACTATG TGAAAGGTAA AGACGTTCGC
CATATTTCTT ATGAAGAAAT GGAAAAAGAG CTGTAA
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| Protein sequence | MNLSKHISGQ FNAELDDIRN RVLAMGGLVE RQLEQALDAL ATLDSELAQQ VIEGDHKVNG
MEVAIDEECT RIIAKRQPAA SDLRLILAIS KTITDLERIG DACVRIAKAA VEKRANSQQP
LLVSIENMGR HATRMLHSTL DALARMDADQ AFELHKEDAK LDKEYEGIIR QLMTHMMEDP
RSIPGVLDVL WAARAVERVG DRCKNICEYV IYYVKGKDVR HISYEEMEKE L
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