Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1346 |
Symbol | |
ID | 4277880 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 1601182 |
End bp | 1602126 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638134121 |
Product | hypothetical protein |
Protein accession | YP_750037 |
Protein GI | 114562524 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTAGCT TATCCGCATT TTTATCAAGG TTTTCTATCG CTTTGTATAC CTTAATTGCC TTGGTCGCGT TTGCTGCCAA TTCAGTTTTG TGTCGCATGG CGTTATCGAC TCAACAAACT CCGGCACTCA TCGATCCCAG TAGTTTTACT GCTATTCGTT TAATCGCAGG TGCGTTGGTA TTGTGGTTGT TAATGCTGTT GCGAAGTACT AAAACCACAG TGAGTAACTC TACTAGCCGT GGCAGCATGT TTGCAGGGGC ATTGTTGTTT ATCTACGCGG TGACTTTTTC ATACGCCTAT GTGTTACTTG ATACCGCGAC CGGAGCACTA ATTTTGTTTG CCGCAGTGCA AATTAGCATG ATGTTAATCA GCTATTTTCA AGGCCAGCGG TTAACGCTAC TTGAGTGGAT AGGCGCATTA TTGGCATTCA GTGGATTTGC TTATTTAGTA TTACCTGGCG TAAGCGCGCC TTCGATGACC GGATTAGTAT TAATGGCGAT CAGCGGTTGT GCTTGGGGCG GGTATACTTT GTTAGGTAAA AAGTCAGTTA ACCCATTATT TGATACAGGT TATAACTTTA TTCGCAGCCT ACCTTTGGTT GTGGTGATGA TATTGGTGGT GTGGCTCCTG CCTCAATTAA CCTCAGCGAC ACAATTAGTC TCAATATCAC AAGTAACAGT ATTGTCTGCT AAAGGTATAT TGTTAGCAGT GTTATCGGGT GCAATGGCAT CGGGTATTGG TTATGCGTTG TGGTATCAAG CATTGCGCGG ACTCACATCA ACCCATGCTG CAGTTTTACA ATTAACGGTA CCTGTGATTG CCGCAGTGGG CGGTATTCTC TTTTTAGATG AAGTGCTCAG TTTTCATCTT AGTGTATCGG CGGGCATTAT TTTTGTTGGG ATTGCATTGG TTATTTTTGC TAAATCCCAT CCAGTTAGCC AGTAA
|
Protein sequence | MSSLSAFLSR FSIALYTLIA LVAFAANSVL CRMALSTQQT PALIDPSSFT AIRLIAGALV LWLLMLLRST KTTVSNSTSR GSMFAGALLF IYAVTFSYAY VLLDTATGAL ILFAAVQISM MLISYFQGQR LTLLEWIGAL LAFSGFAYLV LPGVSAPSMT GLVLMAISGC AWGGYTLLGK KSVNPLFDTG YNFIRSLPLV VVMILVVWLL PQLTSATQLV SISQVTVLSA KGILLAVLSG AMASGIGYAL WYQALRGLTS THAAVLQLTV PVIAAVGGIL FLDEVLSFHL SVSAGIIFVG IALVIFAKSH PVSQ
|
| |