Gene Sfri_1341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1341 
Symbol 
ID4277875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1597181 
End bp1597963 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content48% 
IMG OID638134116 
Productenoyl-CoA hydratase 
Protein accessionYP_750032 
Protein GI114562519 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGCAC ACCCTGCGAT TCTTAAACAT ATAGTCGGCC ACACGGCCAT TTTGACCTTG 
AACAATCCGC CAGCCAACAC CTGGACAGCA GACAGCTTGC AAGCACTGAA ACACACAGTA
CTTGAACTGA ATCAAAACAA GGACGTTTAT GCCCTTGTGA TTACCGGTCA AGGTGACAAG
TTTTTCTCAG CAGGCGCTGA TTTGAATTTG TTTGCCGACG GCGATAAACA AAATGCAGCC
TCCATGGCAA AACATTTCGG TGAAGCGTTT GAAGCATTAA GTGCATTTAG AGGTGTTTCG
ATTGCGGCCA TTAATGGTTA TGCCATGGGT GGCGGGTTAG AAGTGGCATT AGCCTGCGAT
CTACGTATTG CAGAAGCGCA AGCCCAAATG GCATTGCCAG AGGCCTCAGT GGGGTTACTA
CCTTGTGCTG GTGGCACCCA AAACCTAACG GCTTTAGTGG GGGAAGGTTG GGCAAAACGG
ATGATTTTAT GTGGCGAACG TATTGATGCC GCCAAAGCGG AGAAAATAGG CCTTGTTGAA
GAAGTCGTAG GACAAGGTCA TGTCTTAGAT GCTGCAGTGG CATTAGCCGC TAAAGTGGCT
AAGCAATCAC CTAGCAGTGT CAGCGTATGT AAAACCCTTA TTCAAGCCGG ACGAACTATG
CCGCGGGCTC AAGCATTGCC GTTTGAGCGC GAAATGTTTG TGGACTTATT TGATACCGAA
GATCAGGCTG AAGGTGTGAA TGCCTTTTTA CAAAAACGCA CTCCAAACTG GAAGAACTGC
TAA
 
Protein sequence
MTAHPAILKH IVGHTAILTL NNPPANTWTA DSLQALKHTV LELNQNKDVY ALVITGQGDK 
FFSAGADLNL FADGDKQNAA SMAKHFGEAF EALSAFRGVS IAAINGYAMG GGLEVALACD
LRIAEAQAQM ALPEASVGLL PCAGGTQNLT ALVGEGWAKR MILCGERIDA AKAEKIGLVE
EVVGQGHVLD AAVALAAKVA KQSPSSVSVC KTLIQAGRTM PRAQALPFER EMFVDLFDTE
DQAEGVNAFL QKRTPNWKNC