Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1341 |
Symbol | |
ID | 4277875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 1597181 |
End bp | 1597963 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638134116 |
Product | enoyl-CoA hydratase |
Protein accession | YP_750032 |
Protein GI | 114562519 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGCAC ACCCTGCGAT TCTTAAACAT ATAGTCGGCC ACACGGCCAT TTTGACCTTG AACAATCCGC CAGCCAACAC CTGGACAGCA GACAGCTTGC AAGCACTGAA ACACACAGTA CTTGAACTGA ATCAAAACAA GGACGTTTAT GCCCTTGTGA TTACCGGTCA AGGTGACAAG TTTTTCTCAG CAGGCGCTGA TTTGAATTTG TTTGCCGACG GCGATAAACA AAATGCAGCC TCCATGGCAA AACATTTCGG TGAAGCGTTT GAAGCATTAA GTGCATTTAG AGGTGTTTCG ATTGCGGCCA TTAATGGTTA TGCCATGGGT GGCGGGTTAG AAGTGGCATT AGCCTGCGAT CTACGTATTG CAGAAGCGCA AGCCCAAATG GCATTGCCAG AGGCCTCAGT GGGGTTACTA CCTTGTGCTG GTGGCACCCA AAACCTAACG GCTTTAGTGG GGGAAGGTTG GGCAAAACGG ATGATTTTAT GTGGCGAACG TATTGATGCC GCCAAAGCGG AGAAAATAGG CCTTGTTGAA GAAGTCGTAG GACAAGGTCA TGTCTTAGAT GCTGCAGTGG CATTAGCCGC TAAAGTGGCT AAGCAATCAC CTAGCAGTGT CAGCGTATGT AAAACCCTTA TTCAAGCCGG ACGAACTATG CCGCGGGCTC AAGCATTGCC GTTTGAGCGC GAAATGTTTG TGGACTTATT TGATACCGAA GATCAGGCTG AAGGTGTGAA TGCCTTTTTA CAAAAACGCA CTCCAAACTG GAAGAACTGC TAA
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Protein sequence | MTAHPAILKH IVGHTAILTL NNPPANTWTA DSLQALKHTV LELNQNKDVY ALVITGQGDK FFSAGADLNL FADGDKQNAA SMAKHFGEAF EALSAFRGVS IAAINGYAMG GGLEVALACD LRIAEAQAQM ALPEASVGLL PCAGGTQNLT ALVGEGWAKR MILCGERIDA AKAEKIGLVE EVVGQGHVLD AAVALAAKVA KQSPSSVSVC KTLIQAGRTM PRAQALPFER EMFVDLFDTE DQAEGVNAFL QKRTPNWKNC
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