| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1331 |
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| Symbol | |
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| ID | 4278005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1585202 |
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| End bp | 1586188 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638134106 |
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| Product | fumarylacetoacetate (FAA) hydrolase |
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| Protein accession | YP_750022 |
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| Protein GI | 114562509 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0166395 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTTG CAAGTTATCA CAACGGACGT CGCGACGGCC AATTGATGTT AGTCAGTAAA
GATTTGACCA AAACAGTCGC GGTACCCGCT ATTGCCCATA CTATGCAGCA ATTATTAGAT
GCTTGGGATT TGTTATACCC ACAACTTAAT GAGTTGTATG AAGCACTAAA CGCCGGTCAG
ATGGACAATG CAGTAGATTT TGATGAAGCA CGTTGTTTAT CCCCTTTACC CCGAGCCTAC
CAATGGGCCG ATGGCAGTGC GTATGTTAAC CATGTTGAGT TAGTACGCAA AGCACGTGGC
GCTGAAATGC CAGCATCGTT TTGGACTGAT CCATTGGTGT ATCAAGGTGG TTCTGACAGT
TTTATCGCCC CTAAAGCGGA TATTCAAATG GCCAGCGAAG AATACGGTAT CGATTTCGAA
TCAGAAATCG CTATTGTTAC TGATGATGTT GTCATGGGTG TTAACAGTGA AGATGCAACT
AAGCACATCA AATTATTGAT GTTGGTTAAC GACGTATCAC TGCGTAACTT AATCCCTGGC
GAATTAGGCA AAGGCTTTGG CTTTTTTCAA TCTAAGCCAT CTAGTGCATT TTCGCCCATT
GCGATTACCC CAGATGAATT AGGTGATAAA TGGCAAGACA GCAAAGTACA TTTGCCGTTA
GTGACTCATT TAAACAGTGA ACTATTTGGT CGCCCGAATG CTGGCGTTGA CATGACGTTT
AACTTTAGCC AGTTAGTAGA GCATGTGGCT AAAACACGTC CATTAGGCGC AGGTGCAATT
ATTGGTTCTG GTACTATTTC TAACTACGAT CGCAGTGCAG GTTCAAGCTG TTTAGCGGAA
AAGCGAATGC TTGAAATCAT TGCCGACGGT AAAGCCTCAA CGCCGTTCAT GCACTTTGGC
GACACGGTTC GCATTGAAAT GTTTGATGAT AACGGTGTGA GCATCTTTGG TTCTATCGAT
CAAAAAGTGG TTGAATACAA AGCTTAA
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| Protein sequence | MKLASYHNGR RDGQLMLVSK DLTKTVAVPA IAHTMQQLLD AWDLLYPQLN ELYEALNAGQ
MDNAVDFDEA RCLSPLPRAY QWADGSAYVN HVELVRKARG AEMPASFWTD PLVYQGGSDS
FIAPKADIQM ASEEYGIDFE SEIAIVTDDV VMGVNSEDAT KHIKLLMLVN DVSLRNLIPG
ELGKGFGFFQ SKPSSAFSPI AITPDELGDK WQDSKVHLPL VTHLNSELFG RPNAGVDMTF
NFSQLVEHVA KTRPLGAGAI IGSGTISNYD RSAGSSCLAE KRMLEIIADG KASTPFMHFG
DTVRIEMFDD NGVSIFGSID QKVVEYKA
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