Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1320 |
Symbol | |
ID | 4277382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 1575452 |
End bp | 1576252 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638134095 |
Product | 3'(2'),5'-bisphosphate nucleotidase |
Protein accession | YP_750011 |
Protein GI | 114562498 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1218] 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase |
TIGRFAM ID | [TIGR01331] 3'(2'),5'-bisphosphate nucleotidase, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTCTAACA TTGTATTTTC TAAAACAGAC TTACAGAAGA TAGTGGCGAT TGCCAAGCAA GCAGGTGAAG CCATTATGCA AGTTTATGCT CAAACTGATT TGCAGATTGA GGTTAAACAA GATGATAGCC CTGTTACTGC AGCCGATATT GCCAGCCATA ATGTAATTGT TGCCGGCCTT AAACAGCATT TTGCTGAGAT TGCCGTAATG AGCGAAGAAG CGGCTGACAT CAGCTGGGCA GAACGACAAA CGTGGCAAAC GTATTGGTTG ATCGATCCGC TAGATGGCAC CAAAGAATTT ATTAAACGCA ACGGTGAATT TACGGTCAAT ATTGCGCTTA TTCACCAAGG CAAAGCGATT GCTGGTGTGG TGTATGCACC AGTATTAGGC AAATGTTATA GCGGCATTGT TGGTCAAGGT GCGTGGCTTG AACATAATGG ACAAGTATCG GTATTGGATA TTAGTGACAC AGCAGTGCAA TCGCCACCTA TCGTAGTCGG AAGCCGCTCT CACGTTAGCC CTGATGTTGC AGCATATTTA CAGACTATTG GCGAACATCA AATGTTAAGC GTCGGCAGTT CATTAAAATT TTGTATGGTG GCAGAAGGCC AAGCCGATGT GTACCCAAGA TTAGGCCTAA CCAGTGAATG GGATACCGCC GCAGCGCAAG CAGTATTAGA AAGTGCTGGT GGGCAGGTGG TTGAATATCC AGCGCTTACA CCGCTGCAAT ACAACCAAAA AGAAAATATT TTAAATCCGT ATTTTATTGC CGCATCGTCG GCATGGTTTG CACGCAAATA G
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Protein sequence | MSNIVFSKTD LQKIVAIAKQ AGEAIMQVYA QTDLQIEVKQ DDSPVTAADI ASHNVIVAGL KQHFAEIAVM SEEAADISWA ERQTWQTYWL IDPLDGTKEF IKRNGEFTVN IALIHQGKAI AGVVYAPVLG KCYSGIVGQG AWLEHNGQVS VLDISDTAVQ SPPIVVGSRS HVSPDVAAYL QTIGEHQMLS VGSSLKFCMV AEGQADVYPR LGLTSEWDTA AAQAVLESAG GQVVEYPALT PLQYNQKENI LNPYFIAASS AWFARK
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