| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1314 |
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| Symbol | |
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| ID | 4277376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1565677 |
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| End bp | 1566735 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638134089 |
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| Product | transcriptional regulator, LacI family protein |
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| Protein accession | YP_750005 |
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| Protein GI | 114562492 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGTCT TGGAGCCATG TGCTCCAAGA TGGCTTTTAA ATACTCATTA TATGGCAACT
ATTTACGATG TATCCGTAAT GGCTGGTGTG TCTCTGGCGA CTGTGTCCCG AGTCATGAAC
AACAACACCA AAGTCAGCGA TAAAACCAAA CAAAAAGTAC TCGATGCAAT GAAAGCCTTA
GGTTACCGAC CTAATACCAT TGCACAGTCG CTTGCCTCGA ACTGTTCAAA CAGTGTCGGG
GTTTTGGTGT CTCAGCTTGA CGGGCCTTTT TATGGTCCTA TGATGACAGA AATTGAAACA
GCCCTTCGAA CAGCTAACAA GCACGTGATT ATTGCTGCTG GTCATAGTGA CGAGAAGCAA
GAAAAAGAAG GGGTTGAGTT TTTAATGAGT CGCGGCTGTG ATGCCCTTAT TTTGGATATT
GAGGCTGTAT CAGACGATTA CTTGATTGAA CTCAGTAAAG GCTCAACACC TGTGGTATTT
ATTAACCGCT ATATCGACGC TATCAAAGAA CGCTGTGTTT ATCTTGAAAA TGAACAAGGT
GGTTTCATGG CTACCGAGCA CATTTTATCA CTTGGCCATA AAGACATCGC ATACATTTCA
GGGCCATTGT TTAAGCTCGA CGTGAGAGAT CGTCTAAAAG GGCATAAACG AGCATTGCAA
CAATACAATA TCGATTTTGA TGACACCCTT TGCATTGAAA GTGACTTTAA AGAAGCTGGC
GGTTGTGAGG CGATGGAACG TTTATTGTCG ATGAATAAAA CCATCACTGC AGTTGTGTGT
GCGAATGATC AAATGGCCTC TGGGGCTATT GCGGTGTGTT TAGAACACGG AATCCGCGTA
CCTGATGACA TTTCATTTAT TGGTTACGAT AACATCCCCT TCCCACAGTA TATTTCGCCC
AAGTTATCTA CCGTGAGTAA CCCTATTCAC GAAATGGGCA AAATGGCGGC ACGATGGGTT
CTTCAAGAAG TCTATAATGA CAAAGAAGTA ATTGTTGAGA GTTCATTTAA GCCAGAGTTA
TTTATACGAA GTTCATCTCA AGCCATTTCT CACGATTAA
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| Protein sequence | MLVLEPCAPR WLLNTHYMAT IYDVSVMAGV SLATVSRVMN NNTKVSDKTK QKVLDAMKAL
GYRPNTIAQS LASNCSNSVG VLVSQLDGPF YGPMMTEIET ALRTANKHVI IAAGHSDEKQ
EKEGVEFLMS RGCDALILDI EAVSDDYLIE LSKGSTPVVF INRYIDAIKE RCVYLENEQG
GFMATEHILS LGHKDIAYIS GPLFKLDVRD RLKGHKRALQ QYNIDFDDTL CIESDFKEAG
GCEAMERLLS MNKTITAVVC ANDQMASGAI AVCLEHGIRV PDDISFIGYD NIPFPQYISP
KLSTVSNPIH EMGKMAARWV LQEVYNDKEV IVESSFKPEL FIRSSSQAIS HD
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