Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1295 |
Symbol | |
ID | 4278493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 1536591 |
End bp | 1537304 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638134070 |
Product | hypothetical protein |
Protein accession | YP_749986 |
Protein GI | 114562473 |
COG category | [S] Function unknown |
COG ID | [COG5343] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.785718 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTATC GTGATCCTCA ATTAAAAGAC GCATTAGCAG CAGAATATGT GCTTGGTACA TTGCGTGGCC AAGCTAGACG TCGGTTTCAA AAATTAATGA TGCAAATTCC CAGTCTGCGT GAAAGCACTT GGTTATGGGA GCAACATTTA CATGGCATGA ATCAATTGTT AACGCCGATA ACCCCAGATG AACGGGTTTG GCAACAAATC AGTATGTCGC TAGGGTTTGT TGATAATGTG GCCCAAGCAC CATCGCCAGA AACCTCAAAT GTGGTGCCTA TGGCAACACG TAACCGTTTA TGGAAGGGAT TGGCTTCAAT GGCAAGCGCA GCAGCCATTG TTATGGCTGT TTTAGTTGTG AATAATCAGC CTGTACCAGT TGCTACATCG CAGCAAGTTG CGGTAGTGCA AAGTGCACAA TCTAAAGCAT TATGGCTGAT TGAAGTCACC TCCAATACGA TTGAAGTGCG CTCTACCAGT AACCTAAAGC CACTGGCGAA TAAAGACTAT GAGTTATGGA TGGTGGCTAA AGGTGTCGAA AATCCAATTT CATTAGGCTT ACTGCCTAAG TCAGGCAAGT TAACATTGGT GAAAAATAGT CAATTTGATG ACATGGATAT AGTGGCTCTG GCGGTGAGTT TAGAGCCTTT GAACGGCTCA CCAAATGACT TACCAACAGA GGTATTGTAT ACCGCAGAGC TAGCAATTTT ATAA
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Protein sequence | MNYRDPQLKD ALAAEYVLGT LRGQARRRFQ KLMMQIPSLR ESTWLWEQHL HGMNQLLTPI TPDERVWQQI SMSLGFVDNV AQAPSPETSN VVPMATRNRL WKGLASMASA AAIVMAVLVV NNQPVPVATS QQVAVVQSAQ SKALWLIEVT SNTIEVRSTS NLKPLANKDY ELWMVAKGVE NPISLGLLPK SGKLTLVKNS QFDDMDIVAL AVSLEPLNGS PNDLPTEVLY TAELAIL
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