| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1286 |
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| Symbol | |
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| ID | 4278397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1522569 |
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| End bp | 1524035 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638134061 |
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| Product | tRNA(Ile)-lysidine synthetase |
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| Protein accession | YP_749977 |
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| Protein GI | 114562464 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
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| TIGRFAM ID | [TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain
[TIGR02433] tRNA(Ile)-lysidine synthetase, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.170507 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGAAA AGTCTTCGTT AACAGAGCAA ATAAGTGCAC CACAACTGCT AAGTTTGCTC
GAACAAGCGA TATTACCCCT TTATCAAATG AGTGTGGTTA AAGGTGAGTC ATCGCCTAAG
TTAGTACTGG CTTACAGTGG CGGCGTTGAC TCAGAGGTGC TCGCGTGTGG ATTAAGTGCC
TTGGCACACA AACATCCGCA TATTGCTTGC CTGCTTATTC ATGTTCATCA TGGGCTAAGT
GCCAATGCTG ACATTTGGGT ACAGCACTGT ATCACTCGAG CCAATCATTA TCAGCTGCCA
GTGCAGATTG AGCGAGTTAA GGTTGAAAAG GGCCCTCGGC AGAGTCTAGA GGCGCAAGCC
CGCGATGCTC GTTACCAAGC ATTTGACCGT TATCTTAATC CCGGTGACAT TTTACTGACC
GCCCATCATC AAGATGATCA ACTTGAAACC TTATTACTCG CGTTAAAACG TGGTCAAGGC
CCAAAAGGGT TGGCGGCAAT GGGGGCGATA CAAGCTTACA AGCAAGCTTG GCTAGTTAGA
CCGTTATTGG ATATCAGCCG CGATCAAATA GAGCAATTTG CGGCGCAAAA ACAACTATCC
CATATCGAAG ATGAAAGTAA CCAGGACGAC AGCTTTGATA GAAATTTTTT ACGCCTGGAT
ATCATTCCAA GATTAAAACA GCGTTGGCCA AGTATTGCGA CCACCGCAGG GCGTAGCGCC
GCATTATGTG CCGAGCAGCA ACAGGTTATT GATGACGAAG TGAGTCATCG CTTACCCGAG
TGGTTAATAG TGCCAGGCGA TACAAATGCA TTAATGACCG AATCAACCGG GTTTAAACTC
ACCGGGTTTG GTCAATTGAG TGCCGCTTGG CAAGCATTAC TGTTTCGCGG TTATTTAATT
TATTGTGGCG TTAATTTACC GTCGCAAGCA CAATTACAGC AGATCCTGTC ACAACTGTTA
GCGGCTAAAG ACGACGCTAA TATATCGATT CAGTGGGGCG ATTATCAGGT TAAACGCTTT
GCTGGTATCG CTTATGTTGT TAGCCATAAA GAGCTCGACG CTATTGATGC AAGTGCAGTG
CAACAACAAT TTGAGCAACT GCTTAAAGGC GAGCTGCAAC AAACAGTGTG CCGAGTTGGG
CACAAGCAAT GCCAGATCGG TCTGCAAATC GCCACAGACA ATACGCCGCT TCTTGCTTTA
CCGAATAATA CCGTTGTGAG CATACGTTTT GGCGCTGCAG GTTCAATTAA ATGCCAGCCA
CAATTTGCCA CATCACAACG GCAAAAAGCG CGCGAATTAA AGAAATTGTG GCAAGAATGC
AATATCCCGC CATGGCGAAG ACCACAAATC CCGTTAGTTT TTTATGGTGA CACCTTAGTG
GCCGCCGTTG GTTTATGGGT CGACAAACGC TACCTTGCCC AAACCGGTGA TCAAGGGATT
TGTATACCGC TTTTGAACAC CCGATGA
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| Protein sequence | MIEKSSLTEQ ISAPQLLSLL EQAILPLYQM SVVKGESSPK LVLAYSGGVD SEVLACGLSA
LAHKHPHIAC LLIHVHHGLS ANADIWVQHC ITRANHYQLP VQIERVKVEK GPRQSLEAQA
RDARYQAFDR YLNPGDILLT AHHQDDQLET LLLALKRGQG PKGLAAMGAI QAYKQAWLVR
PLLDISRDQI EQFAAQKQLS HIEDESNQDD SFDRNFLRLD IIPRLKQRWP SIATTAGRSA
ALCAEQQQVI DDEVSHRLPE WLIVPGDTNA LMTESTGFKL TGFGQLSAAW QALLFRGYLI
YCGVNLPSQA QLQQILSQLL AAKDDANISI QWGDYQVKRF AGIAYVVSHK ELDAIDASAV
QQQFEQLLKG ELQQTVCRVG HKQCQIGLQI ATDNTPLLAL PNNTVVSIRF GAAGSIKCQP
QFATSQRQKA RELKKLWQEC NIPPWRRPQI PLVFYGDTLV AAVGLWVDKR YLAQTGDQGI
CIPLLNTR
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