| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1269 |
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| Symbol | |
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| ID | 4277401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1503099 |
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| End bp | 1503896 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638134044 |
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| Product | methionine aminopeptidase |
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| Protein accession | YP_749960 |
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| Protein GI | 114562447 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0024] Methionine aminopeptidase |
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| TIGRFAM ID | [TIGR00500] methionine aminopeptidase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.210872 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTATTG TGATCAAAAA TGCAGACGAG ATAGAAAAAA TGCGTGCAGC GGGTAAATTA
GCGGCGCAAG TATTAGAAAT GGTAGCTCCA CATGTTAAGG CTGGAGTGAC CACAAATGAG
TTAGACGAAA TTTGTGCTAA ATACACCGAA GAGCAAGGTG CTATTTCTGC ACCGCTTAAT
TATCACGGAT TTCCGAAGTC TATTTGTACC TCGGTAAATG AAGTCGTATG CCACGGTATT
CCTTCTGAGT ACGTGTTGAA AGATGGCGAT ATGATTAACC TAGATATTAC TGTCATCAAA
GACGGTTATC ATGGTGATAC TTCGAAAATG TTTTTAATCG GTGAAGTATC AGCAAAAGAC
AAACGTTTGA GCCGCATTGC CCAAGAAAGC TTGTATTTAG CCATTCGTAA AGTGCGTCCT
GGTTTAAAAT TAGGCGAAAT TGGTACAACC ATCGAAAAAT TCATCAAAAC AAGTAAAACA
GGGCTTGATA AGTACTCCAT CGTACAAGAT TATTGTGGTC ATGGTATTGG CACAGGTTTC
CACGAAGAAC CGCAAGTTGT TCATTATAAA AATAATGACA AGACCGTGTT AAGACCCGGT
ATGTGCTTCA CGATTGAACC AATGATCAAT GCAGGTCGTC ATACTACTGT GTTGGATAAA
AGTGATAATT GGACTGTCAC AACTTCTGAT AGTAAAAACT CTGCACAATG GGAACACACA
CTTTTAGTGA CCCAAACAGG TGTAGAAGTG CTAACGTTGC GTGAAGAAGA AGACTTTCCA
CGTATCATTA ATCACTAA
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| Protein sequence | MSIVIKNADE IEKMRAAGKL AAQVLEMVAP HVKAGVTTNE LDEICAKYTE EQGAISAPLN
YHGFPKSICT SVNEVVCHGI PSEYVLKDGD MINLDITVIK DGYHGDTSKM FLIGEVSAKD
KRLSRIAQES LYLAIRKVRP GLKLGEIGTT IEKFIKTSKT GLDKYSIVQD YCGHGIGTGF
HEEPQVVHYK NNDKTVLRPG MCFTIEPMIN AGRHTTVLDK SDNWTVTTSD SKNSAQWEHT
LLVTQTGVEV LTLREEEDFP RIINH
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