Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1264 |
Symbol | |
ID | 4277396 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 1494897 |
End bp | 1496375 |
Gene Length | 1479 bp |
Protein Length | 492 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638134039 |
Product | PTS system, glucose-like IIB subunint |
Protein accession | YP_749955 |
Protein GI | 114562442 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific [COG1264] Phosphotransferase system IIB components |
TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0238082 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAGCC AGTTGGCACA ACGCCGTCAC ATCGGTAAAC GCAGCGTAAG TTTTTTTACG CAACAATGGT TTAAATTCGC ACAGCGCCTA AGTCAGGCTC TGCTCATACC TATTGCTATT TTGCCTGCTG CAGGGGTGAT GTTAGGGTTA ACCGTTAACC CGTTACCATT TATTCCTGCA GAATTAAATA CGGTGTTTTC TGCGGTCGGC AATCTAGTTT TTACCATGAT GCCTTTGTTG TTTAGTGTTG CGATAGCGAT TGGTTTTTGT CGTGATCAAG GCATTGCAGC ATTTTCAGCC GTCTTTGGTT TTGGAGTGTT TTTATCCACA ATGGGAGCTC TGACCAATAT TTATGGTCTG GTATCTCGTC CTCTCTGGGG CATGCAAACA ATTGACACTG GTATCGCTGG CGGCATGTTA GTCGGCGCGA TGACATGTTT AGCTGTCAAT CTTAGTCAAC ATGTTAAATT ACCTGCTATT TTTTCCTTTT TTGAAGGACG TCGCAGTGCT CCAATAATTA CCATTCCGCT GTCTATGGCA CTTGCTTACC TATTGGTGCA TGTTTGGCCG CCCTTATCGC ATATTATTGA ACTCCTTTCT GATTGGGCTG TATACCAAGA CCCCGCTATT GCTTTTGGTG TTTATGGCAC GGTCGAACGT TTATTAATTC CGTTAGGATT ACATCACATT TGGAATGCCC CATTTTATCT TGAAGTCGGA CAGTACATTA ACCAGGGGAC TGTAGTTCGA GGTGAAGTGG CTCGTTATTT GGCCGGCGAT CCATTGGCGG GAAATCTTGC TGGTGGTTAT TTGATTAAAA TGTGGGGTTT ACCTGCAGCT GCCTTAGCGA TTTGGCGTTG TGCAGATAAG TCTGAACGTA ACCGAGTTGC GGGGATTATG TTATCAGCGG CGACAGCCAG TTGGTTAACC GGGGTGACAG AGCCGATAGA ATTTGCCTTT ATGTTTATCG CACCGATTCT GTTTATTGTA CATGCATTAC TCACGGGAAT TGCTTATAGC GTGTGTATTC TACTCGACGT TCATCACAGC ATTGTGTTCT CTCATGGGTT GGTAGATTTT ACCTTATTGT TTTCGCGCTC TGCTAATACT CAGTGGATTT GGATATTGGG TCCGCTCACA GCAATAATCT ATTATGCAAT TTTTAGGGCC AGTATTTTAG CGTTCAATCT AAAAACGCCT GGCCGATTAG AGCAAAGTGA TTTACCCGCT GAGCCTAAAG AGAGCTTACG GGCAATGATT TCTGCATTGG GCGGCCGCGA GAATATTGTC GAGATTAATG CTTGTTTAAC ACGCTTACGT ATTAGTGTTA ATCAAGCAAA TCTGATCGAT AAAGCTAGAT TAATGCGCTT AGGTGCTAAA GGCGTGGTTG TTATGGGTAA AGGTGTACAA GTTGTTTATG GCACTAAGGC TGAAACATTA CGTAAATTAC TGCAAAAATA TTTAGATTCT CGGCGTTAG
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Protein sequence | MDSQLAQRRH IGKRSVSFFT QQWFKFAQRL SQALLIPIAI LPAAGVMLGL TVNPLPFIPA ELNTVFSAVG NLVFTMMPLL FSVAIAIGFC RDQGIAAFSA VFGFGVFLST MGALTNIYGL VSRPLWGMQT IDTGIAGGML VGAMTCLAVN LSQHVKLPAI FSFFEGRRSA PIITIPLSMA LAYLLVHVWP PLSHIIELLS DWAVYQDPAI AFGVYGTVER LLIPLGLHHI WNAPFYLEVG QYINQGTVVR GEVARYLAGD PLAGNLAGGY LIKMWGLPAA ALAIWRCADK SERNRVAGIM LSAATASWLT GVTEPIEFAF MFIAPILFIV HALLTGIAYS VCILLDVHHS IVFSHGLVDF TLLFSRSANT QWIWILGPLT AIIYYAIFRA SILAFNLKTP GRLEQSDLPA EPKESLRAMI SALGGRENIV EINACLTRLR ISVNQANLID KARLMRLGAK GVVVMGKGVQ VVYGTKAETL RKLLQKYLDS RR
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