| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1244 |
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| Symbol | |
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| ID | 4277359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1473891 |
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| End bp | 1474937 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638134019 |
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| Product | ApbE family lipoprotein |
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| Protein accession | YP_749935 |
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| Protein GI | 114562422 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.462864 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGACG CTAATTCATC AACAATCACC ACTATCATCA CAACATCGAA AGCTTATACC
TTCATGCGCA TAATCAGTTT AGTCATCATG CTATTTTTAT CGCTACTCAG CTCAAACGCT
GCGTTTGCTC AATGGCATCA AAAGAGTTTT GATGTAATGG GAACACTGGC CCATGTTGAG
TTTTGGCTAC CCGACACTGC CGAGTCATCA ACGGCAGAAA GTTTAATTGC CGCTGTAGAG
CATGAAATGC AGCGCATTGA TCAAACAATG AGTCCTTACA TCGCCACCAG CGAACTCAGT
ATCATTAATC GCGATGCCGC CACAAAAACT GTGGCCATAA GCCCAGAGCT ATTTGATTTA
CTCACCGACG CGCAAGATAT TGCCAAATTA ACCAACGGCA TGTTTGATAT CACCTACGCT
TCTATCGGCT ATCAATATGA TTACCGTAAA CACCAAAAGC CCGACCAAGC AGCCATTAAC
AACGCATTAA AAGCAATAAA CTACCAAGCA GTAATGCTCG ATAAATCAAC CTCTTCAGTT
CGTTTTGCTA ATACCGATGT CAAAATTGAT TTAGGCGGCA TAGCCAAAGG ACATGCGGTT
AAAAATTGTA TTTCGATATT AAAAGATGCA AGCATAGAAC ATGCTCTTAT CAGCGCTGGC
GGCGACACGA CATTACTGGG CGATCGCATC GGACGCCCTT GGTTTGTCGG GATAAAACAC
CCTCGTGCTG ACGATAAAAC TGCGGTGCAA TTACCACTTA GTAACGAGTC AATTTCAACT
TCTGGCGATT ACGAACGTTA CTTTATTGAA GACGGCGTGC GTTATCATCA CATTATTAAT
CCTAAAACAG GCGACTCAGC ACGCAATGTT GTCAGCGTGT CGATTATCGG CAAAAATCCA
ACTTTTGTGG ATGCCCTTTC CACCGCCATT TTTGTCATGG GATTACAACA AGGCATGGCG
CTAATCAATG AGTTACCTGA ATACGAAGCG ATCATAATAG ACAATCAACA AACGTTACAT
GTATCGACGG GACTACAACA AGATTAA
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| Protein sequence | MIDANSSTIT TIITTSKAYT FMRIISLVIM LFLSLLSSNA AFAQWHQKSF DVMGTLAHVE
FWLPDTAESS TAESLIAAVE HEMQRIDQTM SPYIATSELS IINRDAATKT VAISPELFDL
LTDAQDIAKL TNGMFDITYA SIGYQYDYRK HQKPDQAAIN NALKAINYQA VMLDKSTSSV
RFANTDVKID LGGIAKGHAV KNCISILKDA SIEHALISAG GDTTLLGDRI GRPWFVGIKH
PRADDKTAVQ LPLSNESIST SGDYERYFIE DGVRYHHIIN PKTGDSARNV VSVSIIGKNP
TFVDALSTAI FVMGLQQGMA LINELPEYEA IIIDNQQTLH VSTGLQQD
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