Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1216 |
Symbol | |
ID | 4278030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 1428443 |
End bp | 1429135 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638133991 |
Product | fumarylacetoacetate (FAA) hydrolase |
Protein accession | YP_749907 |
Protein GI | 114562394 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGTCTAC AATCAGTATC ACTCAAGCAG TCAGATGGCC AAGTAAGTAG CATCATCCCA TCAAAAATTA TTTGTATCGG ACGTAATTAT GCTGAGCATA TTAACGAACT TGGTAATGAC ATTCCTGACG AGATGGTAGT GTTTCTTAAA CCAAACTCAG CCATTACTAA CACGTTATGT AGTCACTTAG GTGAACCTTT ACATTATGAA GCAGAGTTGT GCTTTATGGT GAGTGATGGT CAGTTCAGTG CCGTTGGCGT TGGACTTGAT ATGACTAAGC GTGAGTTACA GACTAAGCTA AAGAAACAAG GTTTACCGTG GGAGCGTTCT AAAGCATTTG ATGGGTCGGC TCTTTTCAGT GAATTTATTG CAATAACACC AGACATCAAA GATTGGTGCT TTCAATTAAC CATTGATAAT GTCGTAACGC AATTAGGTCA TCAGCAATTA ATGATGTACC AGCCACACAC TATTCTTAAT GCTGTTAGTG AGTTTATGAC CTTAAACGAT GGTGACATTG TGATGACAGG CACACCTAAA GGTGTAAGTG TGGTGACAGA AAATGCTACT TTTGAGCTGA GCTTATGGGC TAATGTGCCA TTTACTGTAT TTGAAGCTGC GTTGTCGGGA GATAAACCGA TTGAACAGCT TTGTGGTAAC CCAGAAATCG TTAAGCAATG GCAGGCAAAA TAA
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Protein sequence | MGLQSVSLKQ SDGQVSSIIP SKIICIGRNY AEHINELGND IPDEMVVFLK PNSAITNTLC SHLGEPLHYE AELCFMVSDG QFSAVGVGLD MTKRELQTKL KKQGLPWERS KAFDGSALFS EFIAITPDIK DWCFQLTIDN VVTQLGHQQL MMYQPHTILN AVSEFMTLND GDIVMTGTPK GVSVVTENAT FELSLWANVP FTVFEAALSG DKPIEQLCGN PEIVKQWQAK
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