Gene Sfri_1191 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1191 
Symbol 
ID4277060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1401791 
End bp1402201 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content43% 
IMG OID638133966 
Productflagellar biosynthesis protein, FliO 
Protein accessionYP_749882 
Protein GI114562369 
COG category[N] Cell motility 
COG ID[COG3190] Flagellar biogenesis protein 
TIGRFAM ID[TIGR03500] flagellar biosynthetic protein FliO 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGAATA TAATACTAAT GCTGAGCATT ATGAGTGAGG CGTTAAGCGT CCCTGAAGTG 
TCTAGCACTC TAGCTAAAAA TACCTCTGCT CACCCTGTTG AAGTGTCCAA TGTGGCAACT
TTGGCCAACA TGGTTGGTGG ATTAATTGTC GTATTAGCGA TTATTTTTTT GTTAGCTTAT
ATTGTAAAAC GCCTTAAGTT AGTGCCATCA AGTGGCGGTG TGATTAAAAC GATTGCAGTG
ACTTCCATCG GCCAACGTGA AAAAGTGGTA CTGGTAGAGG TAAATGGCCA GCAATATCTA
CTTGGTGTAA CCTCGCAACA GATTAATCTG ATTGATAAGT TAGCCACTCC CGTCGACGTT
CCCATTTCCT CGTTTGCTAG TCGTCTAAAA CAAGCCAAGG AACAGCAATA A
 
Protein sequence
MANIILMLSI MSEALSVPEV SSTLAKNTSA HPVEVSNVAT LANMVGGLIV VLAIIFLLAY 
IVKRLKLVPS SGGVIKTIAV TSIGQREKVV LVEVNGQQYL LGVTSQQINL IDKLATPVDV
PISSFASRLK QAKEQQ