| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1170 |
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| Symbol | |
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| ID | 4278438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1376941 |
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| End bp | 1378869 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638133945 |
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| Product | flagellar hook-associated protein FlgK |
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| Protein accession | YP_749861 |
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| Protein GI | 114562348 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1256] Flagellar hook-associated protein |
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| TIGRFAM ID | [TIGR02492] flagellar hook-associated protein FlgK |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.793737 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGATTG ACTTACTCAA TATCGCTCGC ACAGGCGTTC AAGCATCTCA AGCACAGTTA
GGGGTGACCA GTAATAACAT CGCCAATGCC AATACTGAAG GTTACAACCG TCAAGTTGCT
ACTCAGTCAT CATTAGAATC ACAACGCTTG GGCAATAGTT TTTATGGCAC CGGTACTTAT
GTGTCGGATG TTAAACGTGT TTATAACGAA TTTGCCGCAC GTGAATTACG CATCGGCCAA
ACCAGCATGA GTGCGGCTGA AACGTCTTAC AGTAAGTTAA GTGAGTTAGA TGAGATTTAT
TCTCAAATTG GCAAAATGGT GCCAGAAAAT CTAAATAACT TTTTTGCTAG CATTAATAGT
GTGGCCGATT TACCGACAGA TCTTGGTATT CGTACAAACA GCTTAAGTTC TGCGCAGCAG
TTGGCCATTG GCTTAAATCA AATGCAATCA CAACTTGATG GCCAAACAAA ACAAACCAAT
AACCAAATAG AATCCATTAC CACTCGAATA AATGAGATAA GCAAAGAACT AGGCAGCATC
AATTTAGAGT TGATGAAATC CCAAGGCCAA GACAGCCAAG TATTAGACAA GCAAGACGCA
CTTATTTTAG AGCTCAGCCA GTATGCTCAG GTTAATGTTA TTCCGTTAGA TACCGGCGCA
AAGTCAATTA TGTTGGGCGG CTCGGTGATG TTGGTATCGG GTGAAGTGTC GATGTCGATG
GGCATGAGTA CTGGCGACCC TTATCCAAAT GAACCGCGCA TTAATGCTTC TATTGGCGAT
AAAACTCTTA ATGTTGATCC GTCTAAGCTG GGTGGTCAAC TTGGCGCATT ATTTTCATTT
AGAGACGACA CCTTATTACC TGCCAGTACT GAACTCGGTC AATTAGCATT AGGCATTGCA
GACACCTTTA ATGAAATGCA GTCCAAAGGT TTTGATTTAA ACGGTGACAT TGGTAGTGAT
ATTTTTCGTG ATATTAACGA CCCATTAATG GCATCTGGCC GTGTCGGAAG TAATTCTACT
AATAGCGGTA CGGCAGCCAT GTCGGTCAAT ATTGACGATG TGGGAGCTTT ATCTGGAGGC
AGTTACCAGC TGGGTTATAC CACATTAGGT GGCTATCAAC TAACAGATAC TCAAACCGGT
AAGCAAACCA CATTAACCCT ATCAGGTAGC CAACTTACAG GTGGCGCAGG TTTTAGCATT
AACATTGACA GTGGTGCGAT AGCTGATGGC GATAAATTTG ATATACGCCC AACAGCGGGT
GCTGCAGCGG GCTTAAAAGT AGTGATGACC GACCCTAAAG GCATTGCCGC AGCAGGGCCT
CAAATTACGC CAAATACAAC CAACTCTGGT GAGTTAGCGG TAAAAGTGAA TGCCATTAAT
CGTGCCGACG CTAACTTCCC GGTTACAGGA AGTGAACTTT CGGTTCGAGT TAATACCAAT
ACCGCTATAA AAACTTTTGA AGTTTTTAAT GCCGCTGGCA CGAGCGTTGG TGGCCCAACA
GCATTTACTC CGCCACAAAT AAATACAGGT TTTGGTTTTA GTTTCGAAAT TGACGACCAA
TCAACCGCAG GTGTCACCGA TACATTCACC TTTGATTTGT CATTTGCCGA AGGCGATAAC
AGCAATGCCG TTGAAATGGC TAAACTGTCG GACACCAAAT TAATGAATAA CGGCACTGGC
ACCTTAACCA GCGTATTTGA AAATACTAAA TTGGATATCG GTAGCCAAAC TAAGTCTGTT
GAAGTGCGCG TGGGCTCAGC GACGGCAATA TATCAACAAG CTAGTACTCG GGTGCAAAGT
GAATCTGGTG TAAACCTTGA TGAAGAAGCT GCAAATCTAT TGCGCTTTCA ACAATCCTAT
CAAGCAGCTG CCAGAATTAT GACTACAGCG CAAACCATTT TCGATACTTT ATTCAGCTCG
GTTCGCTAG
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| Protein sequence | MSIDLLNIAR TGVQASQAQL GVTSNNIANA NTEGYNRQVA TQSSLESQRL GNSFYGTGTY
VSDVKRVYNE FAARELRIGQ TSMSAAETSY SKLSELDEIY SQIGKMVPEN LNNFFASINS
VADLPTDLGI RTNSLSSAQQ LAIGLNQMQS QLDGQTKQTN NQIESITTRI NEISKELGSI
NLELMKSQGQ DSQVLDKQDA LILELSQYAQ VNVIPLDTGA KSIMLGGSVM LVSGEVSMSM
GMSTGDPYPN EPRINASIGD KTLNVDPSKL GGQLGALFSF RDDTLLPAST ELGQLALGIA
DTFNEMQSKG FDLNGDIGSD IFRDINDPLM ASGRVGSNST NSGTAAMSVN IDDVGALSGG
SYQLGYTTLG GYQLTDTQTG KQTTLTLSGS QLTGGAGFSI NIDSGAIADG DKFDIRPTAG
AAAGLKVVMT DPKGIAAAGP QITPNTTNSG ELAVKVNAIN RADANFPVTG SELSVRVNTN
TAIKTFEVFN AAGTSVGGPT AFTPPQINTG FGFSFEIDDQ STAGVTDTFT FDLSFAEGDN
SNAVEMAKLS DTKLMNNGTG TLTSVFENTK LDIGSQTKSV EVRVGSATAI YQQASTRVQS
ESGVNLDEEA ANLLRFQQSY QAAARIMTTA QTIFDTLFSS VR
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